Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00534 ATGATTGGGCGCAGAGACAGAGAGGGACCCTTGATGAGGAACAACAGCACAAACTCTCTACGTAAATCAAGGGTCCTAACCGCAGTTGCAATTGGCGTCCTTATTGGATGCGTCTTCGCTTTCTTGTTCCCCAATGGCTTCTTCGTCTCTGACTCTGTTGCTGCTAATCGCCGCCTCCCTCACGCGGGATCCATGACCCAGGAAAATTCAGCTGGATGTGAATCCTCAGATCGGGTCAACTTATTGAAATCAGAGTTTGTAGCGGTATCAGAGAAGAATGCTGAGCTGAAAAAACAGGTGAGGGAATTGACTGAAAGGCTTCGGCTTGCAGCGCAAGGGGAAGACCAGGCTCAAAAGCAGGTCCTTACGCTGGGTAAACGGCACAAGGCTGGACCTTTTGGTACTGTTAAGGGATTGAGAACCAACCCTACTGTTGTTCCTGATGAGTCTGTGAACCCGAGATTGGGAAAGATATTAGAGAAAGTTGCAGTTAAACGAGAGCTTATAGTTGGACTGGCAAACACCAATGTAAAAGAGATGCTGGAGGTCTGGTTCACCAGCATCAAGAGAGTTGGCATAACCAACTATCTAGTTATTGCTTTAGACGATGAGATTGCAAAGTTTTGTGAATCAAATCAAGTGCCAGTGTATAAAAGAGATCCAGATGATGGTGTTGATATAATTGGAAGAACCGGGAGTAACCATGCTGTCTCTGGTCTTAAATTTCGTATTCTAAGAGAATTTTTGCAGTTGGGATATAGTGTTCTTCTATCAGATGTCGACATTGTATATTTGCAAAATCCATTTGATCATCTATACCGGGATTCAGACGTGGAGTCCATGAGCGATGGTCACAATAACATGACAGCTTACGGCTATAACGATGTCTTTGATGAACCTGCAATGGGTTGGGCTAGATATGCTCATACAATGAGGATATGGGTTTTCAACTCTGGTTTCTTCTATATCAGACCAACAATCCCTTCAATAGAGCTTTTGGATCGCGTGGCAACACGACTTTCAAAAGAGAAAGCATGGGACCAGGCTGTTTTCAATGAGGAACTCTTTTACCCCTCACATCCTGGTTATGATGGGCTTCATGCTGCCAAAAGAACTATGGATATGTATCTCTTCATGAATAGCAAGGTTCTGTTCAAGACAGTGAGGAATGATGCTAACCTCAGCAAATTGAAGCCTGTAATTATTCACGTGAATTATCACCCTGCTAAGCTTCCACGAATGAAAGCAATTGTTGAATACTACGTTGATGGGAAGCAAGATGCTCTCAAACCTTTCCCTGATGGCTCAGAATGGTAA 1317 0.4389 MIGRRDREGPLMRNNSTNSLRKSRVLTAVAIGVLIGCVFAFLFPNGFFVSDSVAANRRLPHAGSMTQENSAGCESSDRVNLLKSEFVAVSEKNAELKKQVRELTERLRLAAQGEDQAQKQVLTLGKRHKAGPFGTVKGLRTNPTVVPDESVNPRLGKILEKVAVKRELIVGLANTNVKEMLEVWFTSIKRVGITNYLVIALDDEIAKFCESNQVPVYKRDPDDGVDIIGRTGSNHAVSGLKFRILREFLQLGYSVLLSDVDIVYLQNPFDHLYRDSDVESMSDGHNNMTAYGYNDVFDEPAMGWARYAHTMRIWVFNSGFFYIRPTIPSIELLDRVATRLSKEKAWDQAVFNEELFYPSHPGYDGLHAAKRTMDMYLFMNSKVLFKTVRNDANLSKLKPVIIHVNYHPAKLPRMKAIVEYYVDGKQDALKPFPDGSEW 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00534 438 Pfam Nucleotide-diphospho-sugar transferase 193 413 IPR005069 -
Phco9g00534 438 PANTHER ARABINOSYLTRANSFERASE RRA3 1 437 IPR044290 GO:0016757|GO:0080147
Phco9g00534 438 Coils Coil 79 113 - -
Phco9g00534 438 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 170 420 IPR029044 -
Phco9g00534 438 SUPERFAMILY Nucleotide-diphospho-sugar transferases 169 376 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00534 Phco-Chr9 3895123 3897264 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00534 9 3895123 3897264 Phco9g00534 9 3895123 3897264 ECH