Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00515 ATGGCTTGTAAATACGAACTTCACAATCTATCAATTTTGTTTGTCTGCTTGTGGACACATTCAAAAACCTTCTTACCTGGTTTAAACCTTCAGCCTCAAGTCCAATTTTCTGACAGCGCCGTGAAACAAAATCACCATCTCAGAGGGTACTGCCAGATCTGTGCCATTTCTTCGAACCACAGAGGCATGGACGAAAAGCTCGTACAGCGGTTAGAATCGGCGGTGTCGCGCTTAGAGTCGCTCTCCGCCGGATTCCACCCATCCGCCTCGCCGGCCAGCGCCGTCGACGCTTCCGATGCGGCGCTCGATCCGTCCGTCGTTGCGTTCGCCGATCTGATCAACCAGTACGTCACTAGGTTTTCCCGCGCTGCGGAGGCTATCGGAGGACAGGTCTTGGATGTATCGAAACTTGTGCAGGAAGCATTCGATGTTCAGAAAGAGCTTTTGATTAAGCTCAAACTAACACAGAAGCCTGACCTCGCTGGGTTTGGTGAATTTCTGAAACCATTGAATGAAGTGATCACGAAAGCTACCAAATTGACAGAAGGAAGGAGATCTGATTTTTTTAATCACTTGAAGGCTGCTGCTGACAGTCTATCAGCTCTAGCATGGATTGCATATAGAGGGAAGGATTGCGGTCTGAGCATGCCAATTGCGCATGTGGAAGAAAGCTGGCAAATGGCTGAGTTTTACAGCAACAAGGTGCTTGTAGAGTACAGAAACAAAGACCCAAATCATGTTGAATGGGCAAAAGCTCTTAAAGAGTTGTATCTGCCTGGATTGAGAGATTATGTCAAGAGCTTTCATCCTTTAGGCCCTGTTTGGAGTCCAACAGGAAAAGTAATTGCTCCATCAAAAGCTTCTGCTCCTGCTGCACCTGCCGCCCCTCCCCCTCCAACTGCTTCTCTCTTTAGTTCTGAATCATCTCAGGCTTCATCTTCTAAGCCTAAAGCGGGGATGTCAGCTGTTTTTCAGGAAATCAGTGCAGGAAATGTCACTTCAGGTTTGAGAAAAGTTACGGCTGATATGAAGACTAAGAATCGCACAGATAGAACTGGAGTTGTTGGCACTATTGAAAGAGAAAGTCATGCAACTTCACGTGTGCCTTCTAAAGTAGGACCTCCAAAATTTGAACTTCAAATGGGCCGCAAATGGGTTGTTGAGAATCAAATTGAGAATAAAGATTTGGTCATTGGAGATTGTGATGCAAAACAGTCTGTATATATTTATGGATGCAAAAACTCTGTTTTGCAGATTCCAGGCAAGGTCAACAATATCACTATTGACAAATGCACAAAGATGGGAGTTGTATTTAAGGATGTTGTTGCAGCATTTGAGATTGTAAACAGTAATGGGGTTGAGGTTCAATGCCAGGGTGCAGCTCCTACAATTTCAGTGGACAACACTTCTGGCTGCCAGCTATATCTGAGCAAAGACTCTTTACTAGCAACCATAACTACAGCAAAGTCAAGCGAGATCAATGTCTTGGTTCCTGGTGCTGAAACTGACGGTGATTGGGTGGAGCATTCTTTGCCACAACAATACATTCATGTGTTCAAGGATGGGCATTTTGAAACAACTTCTGCTTCTCATTCTGGAGGTTAA 1605 0.4511 MACKYELHNLSILFVCLWTHSKTFLPGLNLQPQVQFSDSAVKQNHHLRGYCQICAISSNHRGMDEKLVQRLESAVSRLESLSAGFHPSASPASAVDASDAALDPSVVAFADLINQYVTRFSRAAEAIGGQVLDVSKLVQEAFDVQKELLIKLKLTQKPDLAGFGEFLKPLNEVITKATKLTEGRRSDFFNHLKAAADSLSALAWIAYRGKDCGLSMPIAHVEESWQMAEFYSNKVLVEYRNKDPNHVEWAKALKELYLPGLRDYVKSFHPLGPVWSPTGKVIAPSKASAPAAPAAPPPPTASLFSSESSQASSSKPKAGMSAVFQEISAGNVTSGLRKVTADMKTKNRTDRTGVVGTIERESHATSRVPSKVGPPKFELQMGRKWVVENQIENKDLVIGDCDAKQSVYIYGCKNSVLQIPGKVNNITIDKCTKMGVVFKDVVAAFEIVNSNGVEVQCQGAAPTISVDNTSGCQLYLSKDSLLATITTAKSSEINVLVPGAETDGDWVEHSLPQQYIHVFKDGHFETTSASHSGG 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00515 534 SUPERFAMILY C-terminal domain of adenylylcyclase associated protein 374 533 IPR036223 -
Phco9g00515 534 Pfam Adenylate cyclase associated (CAP) C terminal 374 531 IPR013912 GO:0003779|GO:0007010
Phco9g00515 534 Pfam Adenylate cyclase associated (CAP) N terminal 65 121 IPR013992 GO:0003779|GO:0007010
Phco9g00515 534 ProSiteProfiles C-CAP/cofactor C-like domain profile. 374 511 IPR017901 -
Phco9g00515 534 FunFam Adenylyl cyclase-associated protein 105 280 - -
Phco9g00515 534 MobiDBLite consensus disorder prediction 287 317 - -
Phco9g00515 534 SUPERFAMILY N-terminal domain of adenylylcyclase associated protein, CAP 105 299 IPR036222 -
Phco9g00515 534 Gene3D - 373 533 IPR016098 -
Phco9g00515 534 PANTHER ADENYLYL CYCLASE-ASSOCIATED PROTEIN 64 533 IPR001837 GO:0003779|GO:0007010
Phco9g00515 534 ProSitePatterns CAP protein signature 1. 67 79 IPR018106 -
Phco9g00515 534 Gene3D - 105 280 IPR036222 -
Phco9g00515 534 MobiDBLite consensus disorder prediction 301 317 - -
Phco9g00515 534 SMART carp 450 487 IPR006599 -
Phco9g00515 534 SMART carp 412 449 IPR006599 -
Phco9g00515 534 FunFam Adenylyl cyclase-associated protein 373 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00515 Phco-Chr9 3739217 3745185 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00515 9 3739217 3745185 Phco9g00515 9 3739217 3745185 ECH