Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00508 ATGGCTGTAGCTGATGTTGAGTTTCGGTGCTTTGTCGGTGGGCTCGCATGGGCCACCGACGGTGATGCTCTGGAGAAGGCTTTCTCTAAATACGGGCCAGTTCTTGAATCGAAGATTATCAATGATCGTGAGACTGGAAGATCCAGGGGTTTCGGATTCGTGACCTTTTCATCAGAGCAGGCCATGAGAGAAGCGATCGAAGGAATGAACGGTCAGAACCTTGACGGTCGTAACATTACTGTGAACGAAGCTCAGTCCCGTGGTGGAGGCGGAGGCGGAGGCGGCGGCCGTGGAGGAGGCGGCTATGGAGGTGGAGGTGGTGGATACAGCCGTGGCGGTGGCGGATACGGTGGCGGCGGATATGGTGGTCGTCGAGAGGGAGGGTATAACCGTAGTGGTGGTGGTGGTGGTGGTGGTTATGGTGGTGGTGGATACAGTGGAGGTAGAGATCGTGGTTACGGTGACGGTGGGTCCCGCCACTCTCGTGGAGGTGATGGAGGAGATGGTAGCTGGATGTAG 519 0.5703 MAVADVEFRCFVGGLAWATDGDALEKAFSKYGPVLESKIINDRETGRSRGFGFVTFSSEQAMREAIEGMNGQNLDGRNITVNEAQSRGGGGGGGGGRGGGGYGGGGGGYSRGGGGYGGGGYGGRREGGYNRSGGGGGGGYGGGGYSGGRDRGYGDGGSRHSRGGDGGDGSWM 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00508 172 SMART rrm1_1 9 82 IPR000504 GO:0003723
Phco9g00508 172 MobiDBLite consensus disorder prediction 123 172 - -
Phco9g00508 172 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
Phco9g00508 172 Gene3D - 3 103 IPR012677 -
Phco9g00508 172 SUPERFAMILY RNA-binding domain, RBD 8 118 IPR035979 GO:0003676
Phco9g00508 172 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
Phco9g00508 172 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN RZ1A 5 154 - -
Phco9g00508 172 CDD RRM2_NsCP33_like 9 84 - -
Phco9g00508 172 FunFam Glycine-rich RNA-binding protein GRP1A 2 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00508 Phco-Chr9 3698821 3699611 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00508 9 3698821 3699611 Phco9g00508 9 3698821 3699611 ECH