Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00502 ATGGGGAAAGCGAAGGGGAAGCACCGCTTGGATAAGTACTATCACTTAGCGAAAGAGCATGGTTACAGGTCTCGAGCTTCATGGAAGCTGGTCCAGCTCAATTCCAAGTTCCAATTCCTCGAGTCCGCACGCTCCGTCCTCGACCTCTGCGCCGCCCCCGGAGGCTGGATGCAGGTGGCGGTGCAGCGCGTCCCCGTAGACCACCTCGTTATCGGCGTGGACCTGGCACCCATCGCCCCCATCCGCGGTGCCATCGCCATCCAGGAAGACATCACCAAAACAGAATGCAAGTCCCGCATCAAGAAGCTCATGGGCCAGCACGGATGCCGCGCCTTTGACGTCATTTTGCACGACGGCTCTCCCAATGTCGGCGGCGCCTGGGCTCAGGAAGCCATGAGCCAGAATGCCCTCGTCATCGATGCCGTCAAATTAGCTACTCAGTTCTTAGCGCCCAAGGGTATCTTTGTCACCAAAATTTTCAGGTCGCAAGATTACAGCTCCGTGGTGTATTGCCTGAAGCAGTTGTTTGAGAAGGTTGAGGTGGATAAACCTGCGGCTAGTCGATCTGAATCTGCTGAGATATATGTTTTGGGGCTTAGGTACAAGGCTCCTGCCAAGATTGATCCGCGACTTCTTGATGTGAAGCATCTCTTTCAGGGGTCTGTGGAACCACAGCCGAAGGTGGTGGATGTACTTAGAGATACTAAGCAGAAAAGGCATCGTGACGGGTATGAAGATGGAAACACAACTTTAAGGAAGATCTCTTCAGCTTCAAATTTCATCTGGTCAGATTCTCCTCTGGAGATTCTTGGTTCAGTTACTTCTATAACCTTTACTGATGCAGCTGATTTACAAATCAAGGATCATAAGCAAACAACTGAAGAGGTTAAATCTCTCTGCGATGATTTAAGGGTTTTGGGGAAGCAAGATTTCAAGCATCTTCTAAAGTGGAGGATTCACATTAGAAAAGCTCTTTCACCAACTCAAAAGCCTGATTCTACTACTAAAGAACAGACAAAAATTGAGCAGAAGGTGGATGAAGAAGATATATTACTCAATGAAATGGAGGAGCTGACTAATGTGATGGACCGCAAGAAGAAACATGCAAAGAAGCTTCTTGCTAAAAGAAGAGCCAAGGACAAGGCACGAAAAGCAACAGGGATGCAAATGGATGCAGTTGAAGATGGTTATGTAGATCAGGAGTTGTTTTCTCTTGCCTCTATAAAGGGTAAGAAAGATCTGGTAGCTGTTGACAACACCGAGTATGAAGGTGACGAGGGTGAAGTAGAAGATAGTGAGAATGAAGAAATCCATGAAGTCCCAGGGCGTTCGTCCAGTGACTTGGAAGATTCTGATGAGGAGCGGAAAAGATACAATGAGCAAATGGAAGATTTGTTGGATAAAGCTTATGAGAAGTTTGTCATCAGAAAGGAAGGAAGCTCAAAGCAGCGGAAGCGAATTAAAAAATCCTATGATGCAGAGGCCCAACTTTTGGAGGGCGGTGAGGATGATGATATTGCTCAATCTATGTATGATTCCGATGAAGATCAGGGTGAGCAAGAAGCAAATCCATTGATGATGCCACTTAATGACGGTGCTGAACTCACTCAAGAGGAGATAACAAATAAGTGGTTTAGTCAGGATGTCTTTGCTGAAGCTGCAGAGGAAGGAGACTTTGAGAAGGATGAGAGTAAAGATGAAATGGATGTAGATGATGAGCCTAAGGAGAAGAAATCCATTGCCAAAAAGGTAAAAGAAAATAAAACAGCAGCTCCAGCAGTGGAAGATCACCCTCAACCTCAAGCATCATCCAAGACAGCAGATGATTTTGAAATAGTTCCTGCGCCTGCCACTGATTCAAGTGATGATTCATCCTCTGATGAGTCGGAGGAAGATATCGAAGCTAAAGCTGAGATACTGGCTTATGCAAGGAAGTTGGTGAGGAAAAAACAACGAGATCAGATATTGGATGATGCATATAACAAGTACATGTTTGATGACGAAGGATTGCCCAAGTGGTTTCTAGATGAAGAGAAGAAACACCGCCAACCAGTAAAGCCTATTTCGAAAGAGGAAATGGCTGCAATGAAAGCGCAATTTAAAGAAATTGATGCCCGGCCTGCAAAGAAGGTGGCGGAGGCCAAAGCACGGAAGAAGCGTGCTGCAATGAAGAAGCTTGAGAAGGTACGGAAGAAGGCGAATGCCATATCAGATCAAACAGAGATATCTGATCGTTCGAAGAGGAAGCAAATTGAACAACTCTATAAAAAGGCTGTTCCGAAGAGGCCTAAAAAGGAATATGTAGTTGCAAAGAAAGGTGTACAAGTAAAGACTGGCAAAGGAAAAATCCTTGTTGATCGAAGAATGAAGAAGGATGCTAGGAAACGTGGAATGGGTAGGGGAGGAAAAGGAGGTTCCAAGGCGAAGGGCAAGGCTCCAAAGGGCAAAGGAGCTTCTAAGGCCTCCTCTGCCAAAAAGGGAAAACAGAGGACTAAGGACTAA 2502 0.4588 MGKAKGKHRLDKYYHLAKEHGYRSRASWKLVQLNSKFQFLESARSVLDLCAAPGGWMQVAVQRVPVDHLVIGVDLAPIAPIRGAIAIQEDITKTECKSRIKKLMGQHGCRAFDVILHDGSPNVGGAWAQEAMSQNALVIDAVKLATQFLAPKGIFVTKIFRSQDYSSVVYCLKQLFEKVEVDKPAASRSESAEIYVLGLRYKAPAKIDPRLLDVKHLFQGSVEPQPKVVDVLRDTKQKRHRDGYEDGNTTLRKISSASNFIWSDSPLEILGSVTSITFTDAADLQIKDHKQTTEEVKSLCDDLRVLGKQDFKHLLKWRIHIRKALSPTQKPDSTTKEQTKIEQKVDEEDILLNEMEELTNVMDRKKKHAKKLLAKRRAKDKARKATGMQMDAVEDGYVDQELFSLASIKGKKDLVAVDNTEYEGDEGEVEDSENEEIHEVPGRSSSDLEDSDEERKRYNEQMEDLLDKAYEKFVIRKEGSSKQRKRIKKSYDAEAQLLEGGEDDDIAQSMYDSDEDQGEQEANPLMMPLNDGAELTQEEITNKWFSQDVFAEAAEEGDFEKDESKDEMDVDDEPKEKKSIAKKVKENKTAAPAVEDHPQPQASSKTADDFEIVPAPATDSSDDSSSDESEEDIEAKAEILAYARKLVRKKQRDQILDDAYNKYMFDDEGLPKWFLDEEKKHRQPVKPISKEEMAAMKAQFKEIDARPAKKVAEAKARKKRAAMKKLEKVRKKANAISDQTEISDRSKRKQIEQLYKKAVPKRPKKEYVVAKKGVQVKTGKGKILVDRRMKKDARKRGMGRGGKGGSKAKGKAPKGKGASKASSAKKGKQRTKD 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00502 833 MobiDBLite consensus disorder prediction 497 519 - -
Phco9g00502 833 MobiDBLite consensus disorder prediction 436 460 - -
Phco9g00502 833 Coils Coil 709 739 - -
Phco9g00502 833 Gene3D Vaccinia Virus protein VP39 19 208 IPR029063 -
Phco9g00502 833 PANTHER RIBOSOMAL RNA METHYLTRANSFERASE 5 333 - -
Phco9g00502 833 MobiDBLite consensus disorder prediction 793 814 - -
Phco9g00502 833 MobiDBLite consensus disorder prediction 422 460 - -
Phco9g00502 833 Hamap AdoMet-dependent rRNA methyltransferase <gene_name> [SPB1]. 1 803 IPR028589 GO:0008649|GO:0031167
Phco9g00502 833 MobiDBLite consensus disorder prediction 728 748 - -
Phco9g00502 833 Pfam Spb1 C-terminal domain 604 796 IPR012920 GO:0005634|GO:0006364|GO:0008168
Phco9g00502 833 FunFam AdoMet-dependent rRNA methyltransferase SPB1 19 208 - -
Phco9g00502 833 Hamap Ribosomal RNA large subunit methyltransferase E [rlmE]. 6 202 IPR015507 GO:0001510|GO:0008168
Phco9g00502 833 MobiDBLite consensus disorder prediction 568 592 - -
Phco9g00502 833 Coils Coil 341 375 - -
Phco9g00502 833 MobiDBLite consensus disorder prediction 722 748 - -
Phco9g00502 833 MobiDBLite consensus disorder prediction 778 833 - -
Phco9g00502 833 Pfam FtsJ-like methyltransferase 22 200 IPR002877 GO:0008168|GO:0032259
Phco9g00502 833 Coils Coil 448 468 - -
Phco9g00502 833 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 21 202 IPR029063 -
Phco9g00502 833 MobiDBLite consensus disorder prediction 553 567 - -
Phco9g00502 833 MobiDBLite consensus disorder prediction 495 633 - -
Phco9g00502 833 Pfam Domain of unknown function (DUF3381) 235 383 IPR024576 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00502 9 3639748 3644580 Phco9g00502 9 3639748 3644580 ECH