Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00471 ATGGGTGAGGTAGCGCGTAGTGGATGTTGTCCTCCGATGGATCTGTTCCGTTCGGAGCCGATGCAACTGGTTCAGCTCATCATCCCAATCGAATCTGCTCACCGCACTGTCTCCTACCTCGGCGACCTTGGCCTTCTTCAGTTCAAAGATCTCAATGCAGATAAGAGTCCTTTTCAGCGGACCTATGCAAATCAGATAAAAAGATGTGGAGAGATGGCTCGGAGACTGCGTTATTTCAAGGAGCAAATGTTGAAGGCAGGTGTTTCACCAAAATATTCCACAACACCAGTTGATGTGAACATTGATGACCTTGAGGTAAAACTTACAGAAATTGAGTCAGAGTTAACTGAGATGAATGCAAATGGTGAGAAGTTGCAACGATCGTATAACGAGCTTGTGGAGTATAAGCTTGTTTTACATAAGGCTGGTGAGTTTTTCCGCTCAGCTCAAAGCCGTGCCATAGAGCAGCAGAGAGAATATGAATCCCGTCATCTGGGGGGTGAATCTATGGAAACACCTTTATTACAGGACCAAGAATTGTTAGGTGATTCATCAAAGCAAATTAAGTTGGGGTTTTTAGCTGGTCTTGTTCCCAGGGAAAAGTCTATGGTATTTGAGAGAATTTTATTTCGTGCTACTAGAGGAAATGTATTTTTAAGGCAGGCTACTGTTGAGGACCCTGTCACAGACCCTGTTTCTGGAGAAAAGACTGAGAAAAATGTTTTTGTGATCTTCTACGCTGGTGAAAAAGCAAAAGCCAAGATTCTTAAAATATGTGAAGCTTTTGGTGCTAATCGTTACCCTTTTGCTGAGGAACTTGGAAAGCAAGCTCAAATGATCACAGAGGTTTCTGGAAGACTTTTAGAATTGAAGACCACTATAGATGCTGGACTACTTCACCGGAATAACTTGCTAAATACTATTGGGGCTCAATTTGAGCAATGGGATGTTCTGGTGAGGAAGGAGAAATCTATTCATCATATCCTGAACATGCTGAGCCTTGATGTGACGAAAAAATGTCTTGTGGCTGAGGGGTGGAGTCCTATCTTTGCAAATAAGCAGATCCAGGATGCATTACAGCGGGCAGCATTGGACTCTAATTCTCAAGTCAATGCCATTGTCCAAGTTCTGCATACCAGGGAGTTGCCGCCTACCTATTTCCGCACAAATAAATTTACTTCTTCTTTTCAAGGAATTATTGATTCATATGGGGTTGCTAAGTATCAGGAGGCAAATCCAACTGTGTATACTGTAGTTACCTTTCCATTTCTTTTTGCTGTTATGTTTGGCGATTGGGGGCATGGAATATGTTTACTACTGGCAGCTCTATATTTCATAATCAGGGAGAAGAAACTTTCTAGTCAGAAGCTTGATGACATCACGGAGATGACTTTTGGAGGTCGTTATGTTATTTTGTTGATGGCGTTGTTCTCAATCTACACTGGTTTTATCTATAATGAGTTCTTTTCTGTTCCATTTGCACTCTTTGCCCCCTCTGCATATGATTGCCGTGACCTTTCTTGCAGGGATGCTACAACAGTGGGCTTGATAAAAGTGCGTGACACTTACCCTTTTGGAGTGGATCCTGTATGGCATGGTACACGAAGTGAACTACCATTTCTGAACTCATTGAAAATGAAAATGTCAATTCTTCTTGGTGTTGCTCAAATGAACCTTGGAATTGTGATGAGCTATTGCAATGCCATATTCTTTAGAAACAGAGTGAATGTGTGGTTCCAGTTCATTCCCCAGATGATATTTCTCAACAGTCTATTTGGCTACCTAGCCCTTCTTATTATTGTCAAGTGGTCTACTGGTTCTCAAGCTGATTTGTACCATATTTTGATCTACATGTTCCTGAGCCCGACTGATGATTTGGGTGAGAACCAACTATTTGTTGGTCAGAGAAATTTGCAGCTTGTGCTTTTGCTTCTGGCTGTTGTCTCTGTCCCCTGGATGCTGGTTCCAAAACCTTTTATTTTAAAGAAGCAACATGAAGCTAGGCACGGGGTTGAATCCTATACACCGCTTGAAAGCACAGATGAGAGCCTACAAGTGGAGTCAAACCACGATTCCCATGGTCATGAGGAATTTGAGTTCAGTGAAGTCTTTGTACATCAACTTATACATACCATAGAATTTGTACTTGGAGCAGTCTCTAATACAGCTTCTTACCTCCGTCTATGGGCCCTTAGCCTTGCTCATTCAGAGTTATCAAGTGTATTCTACGAGAAGGTTCTGCTGATGGCATGGGGGTACAATAATGTGATTATCCTGATAGTGGGTCTCATTGTTTTCATCTTCGCCACCGTCGGAGTGTTACTTGTCATGGAAACTCTTAGCGCCTTCTTGCATGCGTTACGACTTCACTGGGTGGAGTTTCAGAACAAGTTTTACGAGGGCGATGGTTACAAATTCCACCCTTTCTCTTTCTCCTTACTGGATGATGAAGAATGA 2457 0.4233 MGEVARSGCCPPMDLFRSEPMQLVQLIIPIESAHRTVSYLGDLGLLQFKDLNADKSPFQRTYANQIKRCGEMARRLRYFKEQMLKAGVSPKYSTTPVDVNIDDLEVKLTEIESELTEMNANGEKLQRSYNELVEYKLVLHKAGEFFRSAQSRAIEQQREYESRHLGGESMETPLLQDQELLGDSSKQIKLGFLAGLVPREKSMVFERILFRATRGNVFLRQATVEDPVTDPVSGEKTEKNVFVIFYAGEKAKAKILKICEAFGANRYPFAEELGKQAQMITEVSGRLLELKTTIDAGLLHRNNLLNTIGAQFEQWDVLVRKEKSIHHILNMLSLDVTKKCLVAEGWSPIFANKQIQDALQRAALDSNSQVNAIVQVLHTRELPPTYFRTNKFTSSFQGIIDSYGVAKYQEANPTVYTVVTFPFLFAVMFGDWGHGICLLLAALYFIIREKKLSSQKLDDITEMTFGGRYVILLMALFSIYTGFIYNEFFSVPFALFAPSAYDCRDLSCRDATTVGLIKVRDTYPFGVDPVWHGTRSELPFLNSLKMKMSILLGVAQMNLGIVMSYCNAIFFRNRVNVWFQFIPQMIFLNSLFGYLALLIIVKWSTGSQADLYHILIYMFLSPTDDLGENQLFVGQRNLQLVLLLLAVVSVPWMLVPKPFILKKQHEARHGVESYTPLESTDESLQVESNHDSHGHEEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLLMAWGYNNVIILIVGLIVFIFATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFHPFSFSLLDDEE 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00471 818 Pfam V-type ATPase 116kDa subunit family 39 811 IPR002490 GO:0033179|GO:0046961|GO:1902600
Phco9g00471 818 Coils Coil 101 128 - -
Phco9g00471 818 PIRSF ATP6V0A1 11 818 IPR026028 GO:0000220|GO:0046961
Phco9g00471 818 PANTHER VACUOLAR PROTON ATPASES 15 815 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00471 Phco-Chr9 3438811 3451155 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00471 9 3438811 3451155 Phco9g00471 9 3438811 3451155 ECH