Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00461 ATGGCATTCAAACTCAAACAACTACCTCTTCCTTCCTCTCTTCACTCCTCTCCCCGCCAAAACCCTAATTTTACACTTTCAAACCTTCGTCTCCCTCGTCTTTTCTCTGCACCTTCTCTTCCTCTCACTCTCCGTCTCTCAACCACAGCTTCAGCATCCACGTTTCATCGCACTGCATTCGTAACTGCTCGCGCATTTCGAAGCGATGAACTCGCTGACGAAGGCGAAGAAGAAGAAAAAGAAGAAGAAATATCGAGGCAGGGTGAGAAAAAGGAACTGGCAAATAAAGGGATATTGGATCAGATAAAGGAAATTGTGATGTTTACAGGTCCAGCAACCGGACTTTGGATATGTGCACCACTTATGAGTCTCATTGATACTGCAGTTATTGGTCAGAGAAGCTCCATTGAACTTGCTGCTCTCGGTCCTGCTACTGTCGTTTGTGATTACATGAGCTACGTGTTCATGTTTCTATCTATTGCCACTTCCAATATGGTTGCCACTGCCCTTGCTAAACAGGACAAACAAGAAGTACAACATCACATATCTATCTTGGCTTTTGTTGGGTTATCTTGTGGCGTTGTGATGCTTTTGTTCACAAGGCTATTTGGTGCTGCAATAATAACTGCTTTCACTGGGTCAAAGAATGCACACATAGTACCTGCTGCTAGCAGTTATGTAAAGATTCGAGGCTTGGCGTGGCCTGCTTTACTTGTTGGATGGGTTTCTCAAAGTGCAAGTCTTGGCATGAAAGATTCCTTGGGACCCTTGAAGTCTTTGGCTGCTGCTACTGTTATAAATGTTATTGGTTGCATAGTTTTGTGCACCTGGTTAGGCTATGGAATTGTAGGGGCAGCGTGGGCTACAATGGTTTCACAAGTTGTTGCTGCTTACATGATGTTTCAAACACTAAACAAAAAGGGATATAATGCACTTGCCTTCTCCATTCCATCAGGGAAGGAACTTCAGCTGATATTTGGGCTTGCTGCTCCTGTATTTATGACAATGATGTCAAAGGTGGCTTTCTACTCACTGCTTATATATTTCGCTACATCATTGGGTACTCATACAATGGCTGCTCATCAAGTCATGGTCCAAACATATTCCATGTGTACTGTTTGGGGTGAACCTCTCTCCCAAACTGCTCAGTCATTTATGCCCGAATTGATATATGGAGTAAATCGCAGTTTGTCAAAGGCCCAATTGCTTCTGAGGTCTCTTCTGACAATCGGAGTCATACTTGGAATATTGTTAGGGATTGTTGGAACATCAGTTCCTTGGTTATTTCCGTACATTTTTACACCTGATCGAATGGTCACTCAAGAGATGCATAAGGTGCTGATTCCATACTTTATAGCGCTGTCTATAACTCCCCCTACTCACAGCCTCGAGGGAACATTGCTGGCTGGGCGGGACCTGAGATTTATAAGTTTGTCAATGACTGGATGCTTTTGCGTGGGTTCAGTATTATTATGGGCCATGAGTAGTAGATTTGGTTTACTTGGCTGCTGGTTTTCCCTCGCAATATTTCAATGGGCACGCTTTTCAATTGCCCTCCAGCGCATTCTTTCTCCTAAGGGTGTTTTATACTCAGCAAACACAGATCAGCATAAGCTGCGAAAGCTAAGGACTACTTAA 1638 0.4365 MAFKLKQLPLPSSLHSSPRQNPNFTLSNLRLPRLFSAPSLPLTLRLSTTASASTFHRTAFVTARAFRSDELADEGEEEEKEEEISRQGEKKELANKGILDQIKEIVMFTGPATGLWICAPLMSLIDTAVIGQRSSIELAALGPATVVCDYMSYVFMFLSIATSNMVATALAKQDKQEVQHHISILAFVGLSCGVVMLLFTRLFGAAIITAFTGSKNAHIVPAASSYVKIRGLAWPALLVGWVSQSASLGMKDSLGPLKSLAAATVINVIGCIVLCTWLGYGIVGAAWATMVSQVVAAYMMFQTLNKKGYNALAFSIPSGKELQLIFGLAAPVFMTMMSKVAFYSLLIYFATSLGTHTMAAHQVMVQTYSMCTVWGEPLSQTAQSFMPELIYGVNRSLSKAQLLLRSLLTIGVILGILLGIVGTSVPWLFPYIFTPDRMVTQEMHKVLIPYFIALSITPPTHSLEGTLLAGRDLRFISLSMTGCFCVGSVLLWAMSSRFGLLGCWFSLAIFQWARFSIALQRILSPKGVLYSANTDQHKLRKLRTT 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00461 545 CDD MATE_DinF_like 103 524 IPR044644 -
Phco9g00461 545 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 72 528 IPR044644 -
Phco9g00461 545 MobiDBLite consensus disorder prediction 1 22 - -
Phco9g00461 545 Pfam MatE 117 272 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Phco9g00461 545 NCBIfam MATE family efflux transporter 111 504 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00461 Phco-Chr9 3322669 3335115 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00461 9 3322669 3335115 Phco9g00461 9 3322669 3335115 ECH