Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00460 ATGGCATTCAAACTCAAATCACTACCTCTTCCTTACTCTCTTTACTCCTCTCCCCGCCAAAACCCTAATTTCATGCTTTCAAACCATCGTCTTCCTCGTCGTTTCTCTGCACATTCTCTTCCTCTCAGTCTCTGTCTCTCAAGCACAGCTTCAGCATCCACGTTTCATCGCACTGCCTTCGTTACCGCACGCGCATTTCGAAGTGATGAACTCGCTAACGAAGGCGAAGAAGACAGAGATGAAGAAATACCGAGACAGGGTGACAAAAAGGAACTCGCGAATCTAGGGATATGGAGTCAGATGAAGGACATTGTGATGTTTACAGGTCCAGCAACCGGACTTTGGATATGTGCACCACTTATGAGTCTCATCGATACTGCAGTTATTGGTCAGAGAAGCTCCATTGAACTTGCTGCTCTAGGTCCTGCTACTGTTGTTTGTGATTACATGAGCTACGTGTTCATGTTTCTATCAATCGCCACTTCCAATATGGTTGCCACTGCCCTTGCTAAACAGGACAAAGAAGAAGTACAACACCACATATCTGTTTTGCTTTTTGTTGGGTTATCTTGTGGCATTGCGATGCTTTTATTCACAAGGCTATTTGGTGCTGCAATAATAACTGCTTTCATCGGACCAAAGAATGCACACATAGTACCTGCAGCTAGCAGTTATGTAAAGATTCGAGGCTTGGCTTCACCTGCCTTACTTGTTGGATGGGTTGCTCAGAGTGCAAGTCTTGGTATGAAAGATTCCTGGGGACCCTTGAAAGCTTTGGCTGCTGCTAGTTTTATAAATATAAGTGGTTGTATAATTTTGTGCATCTGTTTAGGCTATGGTATTGTAGGGGCAGCATGGGCTACAATGGTTTCACAAGTTGTTGCTGCTTGCATGATGATTCACACTCTAAAGATAAAGGGATATAATGCACTTGCCTTCTCCATTCCTTCAGGGAAGGAACTTTTGACGATATTTGGGCTTGCTGCTCCTGTATTTATGACAATGATGTCAAAGGTGGCTTTCTACTCACTACTTATATATTTTGCTACATCAATGGGTACACATACAATGGCTGCTCATCAAGTCATGGTCCAAACATATTCCATGTGTACAGTATGGGGTGAACCTCTCTCCCAAACTGCTCAATCATTTATGCCTGAACTGATATATGGAGCAAATCGGAGTTTGTCAAAGGCCCGATTGCTTCTAAGGTCTCTTGTGATAATTGGAGTTATACTTGGCTTATTGTTAGGGATTGTTGGAACATCAGTTCCTTGGTTATTTCCCTACATTTTTACACCTGATCGGATGATCACCCAGGAGATGCATAAGGTGCTGATTCCATACTTTATAGCCCTTGCTGTAACACCCCCTACTATCAGCCTTGAGGGAACATTGCTGGCTGGGCGGGATCTGAGATATATAAGTTTGTCAATGACTGGATGCTTTTGCGTGGGTTCACTAGTATTATGGGCCTTGAGTAGTAGATTTGGTTTGCTAGGCTGCTGGTTTTCCCTCGCAATATTTCAATGGGCTCGCTTTTTGATGGCCCTCCAGCGCCTTCTTTCTCCCAAGGGCATTTTATACTCGGAAGATACAGGCAAGTATGAGCTGCTAAAGCTAAAGACTGCCTAG 1635 0.4379 MAFKLKSLPLPYSLYSSPRQNPNFMLSNHRLPRRFSAHSLPLSLCLSSTASASTFHRTAFVTARAFRSDELANEGEEDRDEEIPRQGDKKELANLGIWSQMKDIVMFTGPATGLWICAPLMSLIDTAVIGQRSSIELAALGPATVVCDYMSYVFMFLSIATSNMVATALAKQDKEEVQHHISVLLFVGLSCGIAMLLFTRLFGAAIITAFIGPKNAHIVPAASSYVKIRGLASPALLVGWVAQSASLGMKDSWGPLKALAAASFINISGCIILCICLGYGIVGAAWATMVSQVVAACMMIHTLKIKGYNALAFSIPSGKELLTIFGLAAPVFMTMMSKVAFYSLLIYFATSMGTHTMAAHQVMVQTYSMCTVWGEPLSQTAQSFMPELIYGANRSLSKARLLLRSLVIIGVILGLLLGIVGTSVPWLFPYIFTPDRMITQEMHKVLIPYFIALAVTPPTISLEGTLLAGRDLRYISLSMTGCFCVGSLVLWALSSRFGLLGCWFSLAIFQWARFLMALQRLLSPKGILYSEDTGKYELLKLKTA 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00460 544 CDD MATE_DinF_like 100 523 IPR044644 -
Phco9g00460 544 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 69 526 IPR044644 -
Phco9g00460 544 Pfam MatE 116 271 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Phco9g00460 544 NCBIfam MATE family efflux transporter 110 503 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00460 Phco-Chr9 3311645 3320352 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00460 9 3311645 3320352 Phco9g00460 9 3311645 3320352 ECH