Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00448 ATGGCCTCTGCATCACCCTCTCTGCTCAAGTCTTCACTTGTTCTTGACAAGTCTGAGTGGGTGAAGGGTCAAACCCTTCGCCAACCTTCTGCATCAGTTGTGAGATGCAGCCCCACCAACCCTTCAGCCCTCACCATCAGAGCTGGTTCTTATGCTGATGAGCTTGTTAAGACTGCGAAAATCGTGGCTTCACCAGGGAGGGGTATTTTGGCTATGGATGAGTCCAATGCTACCTGTGGGAAGCGTTTGGCTTCAATTGGGCTAGAGAATACTGAAGCTAACCGCCAGGCATACCGTACCCTCCTTGTTACAGTTCCAGGCCTTGGTCAGTACATCTCTGGTGCCATTCTCTTTGAGGAAACTCTCTACCAATCCACCATTGATGGCAAGAAGATTGTCGATGTGCTCAAAGAGCAACAAATTGTTCCTGGTATTAAGGTCGACAAGGGTTTGGTTCCCCTTGCTGGATCCAACGATGAGTCATGGTGCCAAGGTTTGGATGGTCTTGCCTCTCGCTCAGCTGCATACTATCAGCAAGGTGCCCGTTTCGCCAAATGGCGTACTGTTGTGAGCATCCCCAATGGTCCCTCTGCTCTGGCTGTTAAGGAAGCAGCCTGGGGTCTTGCTCGCTATGCTGCAATTTCTCAGGACAATGGATTGGTCCCAATTGTGGAGCCAGAGATCTTGCTTGATGGGGAACATACTATTGATAGAACTTTTGAAGTGGCCCAAAAGGTCTGGGCAGAGGTTTTCTTCTACCTTGCTGAGAACAATGTCCTTTTTGAGGGTATTCTCCTCAAGCCTAGCATGGTTACACCTGGAGCACAGTCCAAGGAGAAGGCCAGTCCTCAAACAGTTGCTGATTACACCCTAAAGCTCCTTCACAGGAGAATCCCCCCTGCTGTTCCTGGAATTATGTTTTTGTCTGGTGGACAGTCTGAGATTGAAGCTACCTTAAATTTGAATGCCATGAACCAATCTCCAAACCCGTGGCATGTGTCATTTTCATATGCCAGAGCCCTCCAAAACACTGCCTTGAAGACATGGGGAGGGCTCCCAGAGCAAGTGAAGGCAGCACAAGATGCACTCCTTTTCCGTGCCAAGTCCAACTCACTGGCTCAGCTTGGAAAGTACACTGGTGAGGGTGAATCTGAGGAAGCCAAGAAGGAGTTGTTCGTCGAAGGTTACTCCTACTAA 1197 0.4946 MASASPSLLKSSLVLDKSEWVKGQTLRQPSASVVRCSPTNPSALTIRAGSYADELVKTAKIVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTVPGLGQYISGAILFEETLYQSTIDGKKIVDVLKEQQIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHTIDRTFEVAQKVWAEVFFYLAENNVLFEGILLKPSMVTPGAQSKEKASPQTVADYTLKLLHRRIPPAVPGIMFLSGGQSEIEATLNLNAMNQSPNPWHVSFSYARALQNTALKTWGGLPEQVKAAQDALLFRAKSNSLAQLGKYTGEGESEEAKKELFVEGYSY 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00448 398 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 259 269 IPR029768 -
Phco9g00448 398 FunFam Fructose-bisphosphate aldolase 36 397 - -
Phco9g00448 398 Gene3D Aldolase class I 34 397 IPR013785 -
Phco9g00448 398 SUPERFAMILY Aldolase 44 398 - -
Phco9g00448 398 Pfam Fructose-bisphosphate aldolase class-I 54 398 IPR000741 GO:0004332|GO:0006096
Phco9g00448 398 NCBIfam fructose-bisphosphate aldolase class I 55 374 - -
Phco9g00448 398 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 49 398 IPR000741 GO:0004332|GO:0006096
Phco9g00448 398 CDD FBP_aldolase_I_a 52 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00448 Phco-Chr9 3221222 3223801 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00448 9 3221222 3223801 Phco9g00448 9 3221222 3223801 ECH
Phco7g00108 7 701066 702951 Phco9g00448 9 3221222 3223801 ECH