Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00412 ATGAAGGAATCACCGCCTCCAACTGACCACATCAAGTCATTTTGGCTTCCAAATCCTCCTTACTTCCTCTTCTACGATTCTAAAGTCACGCGAATGGCATCCAAGAGAATACTGAAGGAGCTCAAGGACTTACAGAGAGATCCACCAACTTCATGCAGTGCAGGGCCTGTGGGCGAGGACATGTTCAACTGGCAAGCAACCATCATAGGTCCAAATGACAGTCCTTATGCTGGTGGCGTTTTCCTCGTCATCATCCATTTCCCTCCCGATTATCCCTTCAAACCTCCCAAGGTGGCATTCAGGACCAAGGTGTTCCATCCCAACATTAACAGCAATGGCAATATTTGCCTGGACATACTCAAAGAACAATGGAGTCCTGCCCTCACCATATCGAAGGTGCTGCTCTCTATTTGTTCTCTGCTAACGGATCCAAATCCTGATGACCCTTTGATGCCTGAAATTGCTCACATGTGCAAGAGCGACAAAGTCAAGTATGAGTCCACTGCTAGAAGCTGGACCCAGAAGTATGCCATGGGCTAA 540 0.4778 MKESPPPTDHIKSFWLPNPPYFLFYDSKVTRMASKRILKELKDLQRDPPTSCSAGPVGEDMFNWQATIIGPNDSPYAGGVFLVIIHFPPDYPFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLMPEIAHMCKSDKVKYESTARSWTQKYAMG 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00412 179 CDD UBCc 34 173 IPR000608 -
Phco9g00412 179 FunFam Ubiquitin-conjugating enzyme 28, E2 32 179 - -
Phco9g00412 179 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 60 166 - -
Phco9g00412 179 SUPERFAMILY UBC-like 23 178 IPR016135 -
Phco9g00412 179 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 32 178 IPR000608 -
Phco9g00412 179 SMART ubc_7 35 178 - -
Phco9g00412 179 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 105 120 IPR023313 -
Phco9g00412 179 Gene3D Ubiquitin Conjugating Enzyme 24 179 IPR016135 -
Phco9g00412 179 Pfam Ubiquitin-conjugating enzyme 36 172 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00412 Phco-Chr9 2927545 2929634 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00412 9 2927545 2929634 Phco9g00412 9 2927545 2929634 ECH