Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00400 ATGTGTAGAACGATCGCGTTTCTCGTTCACCCACGAGTCCTCCTTCTCTTCCTTGTTCTCTCAATTTTCCTCATTTTCACGTATACTGGTTCTACTACTACTTATGGTTCTACTACTCCAAAACTGGTTGTTGAGGAGAAAATAGAAGCGGTTCATGAAATTACACATAGAGTATTCTTGGACATTGATATTGATAAACAGCGTTTAGGTAGGATAGTGATTGGATTATATGGCCAAGTTGTACCGAAAACTGTGGAAAATTTTATAGCTTTGTGTACAGGGCGGAAAGAAAAGAGTGAAAATGGCTTAAAGCTTCATTACAAAGGAACACCATTTCATCGGATAGTATCTGGTTTTGTGATTCAGGGTGGAGACATTGTTCATCATGATGGTAAAGGGTCTGAATCTATTTATGGTGGCACCTTTCCTGATGAGAATTTCAAGATTAAACATTCTCATGCTGGAGTAGTCTCTATGGCAAATTCAGGACCTGACTCCAATGGCTCACAGTTTTTCGTTACCACAGTGAAGGCCAGTTGGTTGGATGGAGAGCATGTTGTATTTGGCAAGGTTGTAGAAGGCATGGATATTGTGTATGCAATTGAAGGGGGAGCTGGAACCTACAGTGGAAAACCCAGAAAGAAGGTAGTGATAGCAGACTCTGGGGAGATACCCAAGAGTCAGTGGGATGAGGAAAGTTGA 702 0.4131 MCRTIAFLVHPRVLLLFLVLSIFLIFTYTGSTTTYGSTTPKLVVEEKIEAVHEITHRVFLDIDIDKQRLGRIVIGLYGQVVPKTVENFIALCTGRKEKSENGLKLHYKGTPFHRIVSGFVIQGGDIVHHDGKGSESIYGGTFPDENFKIKHSHAGVVSMANSGPDSNGSQFFVTTVKASWLDGEHVVFGKVVEGMDIVYAIEGGAGTYSGKPRKKVVIADSGEIPKSQWDEES 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00400 233 Gene3D - 44 230 IPR029000 -
Phco9g00400 233 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 155 170 IPR002130 GO:0000413|GO:0003755
Phco9g00400 233 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 183 198 IPR002130 GO:0000413|GO:0003755
Phco9g00400 233 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 170 182 IPR002130 GO:0000413|GO:0003755
Phco9g00400 233 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 112 124 IPR002130 GO:0000413|GO:0003755
Phco9g00400 233 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 76 91 IPR002130 GO:0000413|GO:0003755
Phco9g00400 233 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 59 223 IPR002130 GO:0000413|GO:0003755
Phco9g00400 233 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 57 224 - -
Phco9g00400 233 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 107 124 IPR020892 GO:0003755|GO:0006457
Phco9g00400 233 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 62 221 IPR002130 GO:0000413|GO:0003755
Phco9g00400 233 FunFam Peptidyl-prolyl cis-trans isomerase 44 230 - -
Phco9g00400 233 SUPERFAMILY Cyclophilin-like 50 224 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00400 Phco-Chr9 2821450 2824792 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00400 9 2821450 2824792 Phco9g00400 9 2821450 2824792 ECH