Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00385 ATGTCTCAAATGAAACAGGTTTCAAGAGTTTTGCAGGTTGGAAGCAGAACTATGAGTCTCATCCTTCTGCTGTGTATCATCCTTTTGAGAGGTTTTGAAGTTGATGCATTAGAATATGATTATTCTGCAAGTATTGAGTGTCTTACACATCCATTAAAGCCTCAATATAATGGAGGAATCATTGAAAACCCAGAACTAAATAATGGACTTGAAGGATGGACTTCATTTGGGGATGCAAAAATAGAACATAGAGAATCATTAGGCAACAAATATGTGGTGGCACACAGCAGAAATAAAGCAAATGATAGTGTCTCTCAAAAGATTCATATAGAAAAGGACAAACATTATACTTTATCTGCTTGGATACAAGTGAGTGAGGGGAATGTCCTTGTAACTGCAATTGTGAAAACAAGAACAGGATTAAAATTTGGTGGTGCCATTTTTGCTGAGACTAATTGTTGGTCTATGCTCAAGGGTGGTCTCACAGCTGAAGAATCAGGACCAGCAGAGCTCTATTTTGAGGGAAATAAAACTTCTGTCGAAATATGGATAGACAACGTTTCCTTACAATCATTTGCGGAGAAAGAATGGAGTTCTCATCAAGATCAAAGCATTGAGAAGATTCGTAAGAGGAAGGTATTAATCCAAGCACTGAATGAAGAAGGAAAACCTTTACCAAATGCAAATATATCTTTTGCATTGAAGAAGTTAGGTTTTCCTTTTGGGAGTTCCATGAATAAATACATTCTAAACAATACATTATACCAAAATTGGTTCACCTCTAGATTCACAGTGACCACGTTTGAAAATGAAATGAAGTGGTATAGCACTGAAGCTGTGAAAGGTAAGGAAGACTACATGATTGCAGATGCTATGTTGCAGTTTGCTAAGCAACACAACATAGAAGTTCGAGGTCATAACGTATTTTGGGATGATCCTCATTACCAACCCAGTTGGGTTCCTTCACTATCCCCAACCCAACTCTCCTCTGCAGTGGAAGAGAGGGTCAAATCTGTTGTGTCAAAATACAAGGGCAACCTTATTGCATGGGATGTTGTCAATGAGAATCTGCACTTTTCATTCTTCGAAAGTAAACTTGGACAAACCTTTTCAAGCAAAATTTTCAATGAGGTTCACAATATTGATGGACAAACCACTTTGTTCCTAAATGATTATAACACCATTGAGGAAAGTAGTGATGGTGCATCAAGCCCAGCAAGGTACATCCAGAAGATTAAACAAATTCAGAGTTATGCTGGGAATAGTGGAATCCCAATTGGAATTGGGCTTGAGTCTCACTTCTCTGGCACTATTAATTTTCCCTACATGAGAGCATCTTTAGATTATCTTGGTGCCTCTCGTTTTCCCATTTGGATTACAGAATTAGATGTTGCAAGAGAACCTAGACAGTTACAATACTTTGAACTTGCTCTTAAAGAGGCACACAGTCACCCTATGGTGAGAGGTATTGTGATGTGGACAGCATGGTCACCAGAGGGTTGCTACAGGATTTGCTTAGTAGATAACAATTTCAAGAACTTGCCGGCAGGGAACGTTGTGGACAAATTCATTTCTCAGTGGAAATCAAACAACTTATCAGGAGTTACAGATAAAAATGGATTCCTCGAGGTCACTCTTTTTCATGGTGATTATGAAATGGAGATTGTTCATCCTATTCAAAAGAACAACACTTTTACACAGTTCCTAAAAGTAACTCCCTCAGATAAATCCAATCAAACACAACCAGTTGTAAAACTTCACATAAAGTAA 1770 0.3802 MSQMKQVSRVLQVGSRTMSLILLLCIILLRGFEVDALEYDYSASIECLTHPLKPQYNGGIIENPELNNGLEGWTSFGDAKIEHRESLGNKYVVAHSRNKANDSVSQKIHIEKDKHYTLSAWIQVSEGNVLVTAIVKTRTGLKFGGAIFAETNCWSMLKGGLTAEESGPAELYFEGNKTSVEIWIDNVSLQSFAEKEWSSHQDQSIEKIRKRKVLIQALNEEGKPLPNANISFALKKLGFPFGSSMNKYILNNTLYQNWFTSRFTVTTFENEMKWYSTEAVKGKEDYMIADAMLQFAKQHNIEVRGHNVFWDDPHYQPSWVPSLSPTQLSSAVEERVKSVVSKYKGNLIAWDVVNENLHFSFFESKLGQTFSSKIFNEVHNIDGQTTLFLNDYNTIEESSDGASSPARYIQKIKQIQSYAGNSGIPIGIGLESHFSGTINFPYMRASLDYLGASRFPIWITELDVAREPRQLQYFELALKEAHSHPMVRGIVMWTAWSPEGCYRICLVDNNFKNLPAGNVVDKFISQWKSNNLSGVTDKNGFLEVTLFHGDYEMEIVHPIQKNNTFTQFLKVTPSDKSNQTQPVVKLHIK 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00385 589 Gene3D - 49 192 - -
Phco9g00385 589 SMART glyco_10 272 523 IPR001000 GO:0004553|GO:0005975
Phco9g00385 589 PANTHER GLYCOSYL HYDROLASE 37 578 IPR044846 GO:0004553|GO:0005975
Phco9g00385 589 Pfam Carbohydrate binding domain 60 175 IPR003305 GO:0016798
Phco9g00385 589 Gene3D Glycosidases 229 537 - -
Phco9g00385 589 SUPERFAMILY Galactose-binding domain-like 57 189 IPR008979 -
Phco9g00385 589 SUPERFAMILY (Trans)glycosidases 223 531 IPR017853 -
Phco9g00385 589 Pfam Glycosyl hydrolase family 10 238 494 IPR001000 GO:0004553|GO:0005975
Phco9g00385 589 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 231 523 IPR001000 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00385 Phco-Chr9 2715444 2720157 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00385 9 2715444 2720157 Phco9g00385 9 2715444 2720157 ECH