Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00317 ATGCCAAACCCTAAGGTCTTCTTCGACATGACCATCGGCGGCCAACCCGCCGGTAGGATCGTGTTTGAGCTCTACGCCGACGTCACTCCCCGCACCGCTGAGAACTTCCGCGCCCTTTGCACCGGCGAGAAGGGAATCGGTCGCAGCGGCAAGCCGCTCCACTTCAAGGGCTCGATCTTCCATCGTGTGATCCCGAACTTCATGTGCCAAGGCGGTGACTTTACCGCCGGAAACGGTACAGGTGGCGAGTCGATCTACGGCGCCAAGTTCGCAGACGAGAACTTTGTGAAGAAGCACACCGGCCCCGGCATTCTGTCCATGGCCAACGCCGGTCCTGGAACCAACGGATCTCAGTTCTTCATCTGCACAACGAAGACGGAGTGGCTCGACGGCAAGCACGTGGTGTTCGGACAGGTCGTTGAGGGCCTGGACGTGGTGAAGGAAATCGAGAAGGTCGGATCCGGCTCCGGCAAGACCTCGAGGCCGGTAGCCATCGCTGACTGTGGTCAACTCTCCTAG 519 0.5992 MPNPKVFFDMTIGGQPAGRIVFELYADVTPRTAENFRALCTGEKGIGRSGKPLHFKGSIFHRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENFVKKHTGPGILSMANAGPGTNGSQFFICTTKTEWLDGKHVVFGQVVEGLDVVKEIEKVGSGSGKTSRPVAIADCGQLS 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00317 172 PIRSF Peptidylpro_ismrse 1 172 IPR024936 GO:0003755
Phco9g00317 172 Gene3D - 1 172 IPR029000 -
Phco9g00317 172 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 24 39 IPR002130 GO:0000413|GO:0003755
Phco9g00317 172 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 130 IPR002130 GO:0000413|GO:0003755
Phco9g00317 172 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 103 118 IPR002130 GO:0000413|GO:0003755
Phco9g00317 172 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 60 72 IPR002130 GO:0000413|GO:0003755
Phco9g00317 172 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 131 146 IPR002130 GO:0000413|GO:0003755
Phco9g00317 172 FunFam Peptidyl-prolyl cis-trans isomerase 1 172 - -
Phco9g00317 172 CDD cyclophilin_ABH_like 4 169 - -
Phco9g00317 172 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 5 171 - -
Phco9g00317 172 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 7 170 IPR002130 GO:0000413|GO:0003755
Phco9g00317 172 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 55 72 IPR020892 GO:0003755|GO:0006457
Phco9g00317 172 SUPERFAMILY Cyclophilin-like 2 171 IPR029000 -
Phco9g00317 172 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 7 169 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00317 Phco-Chr9 2157298 2157816 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00317 9 2157298 2157816 Phco9g00317 9 2157298 2157816 ECH