Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00307 ATGGATTTAGCTAATTCCCAGGTTAAACAACTTCCGAGTTCTGTTCAGACTAGCAAACCAGTCTGTTTGTTGAAAAAGAACTCTTTAAGGCGAAAGTGTTTTGCTTTTACTGGGGCACATGAGATTTTCAGACCAGAGATGTGGAGGGCAGCTTTAACAGAATTAACAGCAACCGCATCTCTAATGTTCACCTTGACAACTTCCATTGTTGCATGCTTGGACTCACAGGAGGTGGATCCTAAGCTTCTTGTTCCCTTTGCAGTTTTCATCATAGCCTTTTTGTTCCTACTTGTGACAGTTCCTCTCTCTGGGGGCCACATGAGTCCCGTTTTCACATTCATTGGTGCTTTGAAGGGAGTTGTAACTCTCACCCGTGCTCTCATTTACGTCTTGGCACAATGCATTGGCTCAATAATTGGTTTCCTTCTACTAAAGTGCGTCATAGACCCCAAATTAGCCTACACATATTCCTTGGGAGGTTGTGCCATTGATGGGCAAAGAGTGAGTTTTGGCATTAAGGCACAGAATGCTTTGCTAGTGGAATTCGCATGCACATTTGTGGTACTCTTTGTGGGAGTGACATTGGCATTTGACAAGAAAAGGTCTAGGGAGTTGGGCTTGCCAATGGTGTGTTTGGTGGTGGCAGGAGCCATGGCATTGGCAGTATTTGTGTCCATAACTGTAACTGGGCAGCCTGGTTATGCTGGTGTGGGCCTCAACCCAGCAAGATGCTTAGGCCCAGCATTGCTTCATGGAGGATCACTTTGGCACGGGCATTGGGTTTTCTGGCTTGGGCCTTTCTTGGCATGCATGCTGTATTATGTTGTGTCTATCAACCTGCCAAAGGAAAATTTGGTTTGGGTAGAGGGAGAACATGATGTTTTAAACTTGGCTCTAGGTTCATGCTTCAATGTTTATGATACTTCCTTTTCAAAGGATCTGCCTGAAGAACGCAGTGCAGGGTTCCAACTCCAAGTATGA 981 0.4526 MDLANSQVKQLPSSVQTSKPVCLLKKNSLRRKCFAFTGAHEIFRPEMWRAALTELTATASLMFTLTTSIVACLDSQEVDPKLLVPFAVFIIAFLFLLVTVPLSGGHMSPVFTFIGALKGVVTLTRALIYVLAQCIGSIIGFLLLKCVIDPKLAYTYSLGGCAIDGQRVSFGIKAQNALLVEFACTFVVLFVGVTLAFDKKRSRELGLPMVCLVVAGAMALAVFVSITVTGQPGYAGVGLNPARCLGPALLHGGSLWHGHWVFWLGPFLACMLYYVVSINLPKENLVWVEGEHDVLNLALGSCFNVYDTSFSKDLPEERSAGFQLQV 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00307 326 Pfam Major intrinsic protein 44 271 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phco9g00307 326 SUPERFAMILY Aquaporin-like 40 272 IPR023271 -
Phco9g00307 326 Gene3D Glycerol uptake facilitator protein. 32 284 IPR023271 -
Phco9g00307 326 PANTHER AQUAPORIN-LIKE 22 300 - -
Phco9g00307 326 PRINTS Major intrinsic protein family signature 49 68 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phco9g00307 326 PRINTS Major intrinsic protein family signature 260 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phco9g00307 326 PRINTS Major intrinsic protein family signature 180 198 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phco9g00307 326 PRINTS Major intrinsic protein family signature 221 243 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phco9g00307 326 PRINTS Major intrinsic protein family signature 125 144 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phco9g00307 326 PRINTS Major intrinsic protein family signature 88 112 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00307 Phco-Chr9 2097315 2099304 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00307 9 2097315 2099304 Phco9g00307 9 2097315 2099304 ECH