Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00303 ATGAACCTCATCAATAAACCATCACAACAACTACGTGCTCTATCTACTTTCTGTTCCATTGTCCTGCTTCTGGAATTGGCTTTTGTTGCTGCGGAAGACCCTTATAGATTCTTCGACTGGACCATTACCTACGGTGACATTTATCCTCTGGGAGTAAAACAGCAGGGTATTTTGATCAATGGCCAATTCCCAGGCCCTGAAATCTACTCTGTTACCAATGACAATTTGATCATCAACGTACGCAATAACTTGACCGAGCCGTTTCTCCTATCATGGAATGGTGTTCAACAAAGGAGAAATTCTTACCAAGATGGAGTTTATGGAACCACATGCCCCATCCCTCCTGGGCAGAACTTCACCTACACACTTCAAGTCAAAGATCAAATTGGAAGTTTCTTCTATTTCCCATCTCTTGCTTTCCACAAAGCAGCTGGTGGTTTTGGGGCAATCAAAATCCTTAGCAGGCCAAGGATTCCTGTCCCATTTCCTGACCCAGCTGGTGATTTCAGTCTTCTTATTGGAGATTGGTACCAAATCAATCACAAGACACTTCAAAGTGTTCTAGATTTTGGACATAGACTTCCATTGCCTCAAGCCGTTCTTATCAACGGTCGTCCAAACGGCACAACATTCACAGTTGAACAAGGGAAAACATACAGGCTTAGAATATCAAATGTTGGACTTGAAAACAGTCTCAACTTCAGGATAGAAGGCCACAGCATGAAGTTGGTGGAAGTTGAGGGAACTCACACCATACAAACCACTTATTCCTCGTTAGATGTTCATGTGGGACAATCTTATTCCGTGCTTATCACAGCTGATCAAGCGCCCAAGGACTACTACATTGCAGTGTCCACTCGTTTCACTGACAAAATCATCACAAGCACTGCCATTCTTCACTACAGTAACTCTCAACAATCTGTTTCTGGCCTAATTCCTGGTGGCCCAACCGATCAAATTGATTGGTCCCTCCAACAAGCTCGTTCAATCAGGACAAACTTGACAGCAAGTGGACCAAGGCCAAATCCTCAAGGCTCCTACCATTATGGTTTAATTAACGTTAGTAGGACAATTACATTGGTGAGCTCAGCAGCACAAGTGAATAGGAAACAGAGATATGCAGTGAACAGTGTATCATTCATACCAGCTGACACTCCTTTGAAGCTCGCTGATTACTTCAAGATTGGTGGGGTTTTCCAAGTTGGAAGCATTCCAGATAGCCCTTCTCGTAAACCCATGTATCTTGACACCTCAGTCATGGGTGCTGATTTTCGAGCCTTCGTTGAGATCGTGTTTCAGAACCACGAAAACATTGTCCAAAGCTGGCACATTGACGGATACTCGTTTTGGGTTGTAGGAATGGATGGTGGTGTGTGGACACCTCAAAGTCGTAACGAGTACAATCTTAGAGATGCAGTATCAAGGTGCACAACACAGGTGTATCCCAAGTCATGGACTGCAATTTACATGGCACTGGATAATGTGGGTATGTGGAATGTGAGGAGTGAATTTTGGGCACGACAGTACCTTGGACAACAATTCTATATGCGAGTGTATTCACCAGTTGGATCAATCAGGGATGAATACCCAATTCCCAAAAATGCTCTTCTTTGTGGCAAAGCGGCAGGAAGAACAAGTAGATGA 1644 0.4386 MNLINKPSQQLRALSTFCSIVLLLELAFVAAEDPYRFFDWTITYGDIYPLGVKQQGILINGQFPGPEIYSVTNDNLIINVRNNLTEPFLLSWNGVQQRRNSYQDGVYGTTCPIPPGQNFTYTLQVKDQIGSFFYFPSLAFHKAAGGFGAIKILSRPRIPVPFPDPAGDFSLLIGDWYQINHKTLQSVLDFGHRLPLPQAVLINGRPNGTTFTVEQGKTYRLRISNVGLENSLNFRIEGHSMKLVEVEGTHTIQTTYSSLDVHVGQSYSVLITADQAPKDYYIAVSTRFTDKIITSTAILHYSNSQQSVSGLIPGGPTDQIDWSLQQARSIRTNLTASGPRPNPQGSYHYGLINVSRTITLVSSAAQVNRKQRYAVNSVSFIPADTPLKLADYFKIGGVFQVGSIPDSPSRKPMYLDTSVMGADFRAFVEIVFQNHENIVQSWHIDGYSFWVVGMDGGVWTPQSRNEYNLRDAVSRCTTQVYPKSWTAIYMALDNVGMWNVRSEFWARQYLGQQFYMRVYSPVGSIRDEYPIPKNALLCGKAAGRTSR 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00303 547 CDD CuRO_1_AAO_like_1 37 152 IPR034273 GO:0005507
Phco9g00303 547 Pfam Multicopper oxidase 169 303 IPR001117 -
Phco9g00303 547 CDD CuRO_3_AAO_like_1 382 503 IPR034275 GO:0005507
Phco9g00303 547 Gene3D - 350 545 IPR008972 -
Phco9g00303 547 Gene3D - 167 311 IPR008972 -
Phco9g00303 547 PANTHER MULTI-COPPER OXIDASE 54 517 IPR045087 -
Phco9g00303 547 SUPERFAMILY Cupredoxins 162 341 IPR008972 -
Phco9g00303 547 Gene3D - 35 156 IPR008972 -
Phco9g00303 547 FunFam L-ascorbate oxidase homolog 35 156 - -
Phco9g00303 547 SUPERFAMILY Cupredoxins 28 182 IPR008972 -
Phco9g00303 547 Pfam Multicopper oxidase 386 520 IPR011706 GO:0005507|GO:0016491
Phco9g00303 547 FunFam Monocopper oxidase-like protein 351 547 - -
Phco9g00303 547 SUPERFAMILY Cupredoxins 351 540 IPR008972 -
Phco9g00303 547 Pfam Multicopper oxidase 42 155 IPR011707 GO:0005507
Phco9g00303 547 FunFam Monocopper oxidase-like protein 166 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00303 Phco-Chr9 2078324 2081464 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00303 9 2078324 2081464 Phco9g00303 9 2078324 2081464 ECH