Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00253 ATGATGGATTGCGGCGTTGGATCCATCGTGTGGGTGCGACGGAGGAACGGGTCGTGGTGGCCGGGTCAAATCCTCGGCCCCGACGACCTCTCCGCTTCTCACCTCACCTCACCTCGATCCGGAACACCGGTCAAGCTCCTCGGCAGAGAAGACGCCAGCGTGGATTGGTACAATTTGGAGAAATCCAAGCGTGTTAAGGCATTCAGGTGTGGTGAGTTTGATGATTGTATTGAAAAGGCCGAATCTGCTCAGGGGGGACCGCTGAAGAAGAGAGAGAAGTATGCGCGCCGAGAAGACGCCATTCTTCATGCTCTTGAGCTTGAGAAACAGATTTTGAAGAAGCAGGGGAGATCAGGTGCTAGACCGTCAAATACTTTTAAAAAGGGTGTATTTGCATCGCCACCGGAAACACTAGGAAATGACAATGAAAACCATGCAAGTTCTTTTATGTATTGTGAAAGTGAGTCTGCTGGAGGTTTCTTTCCTCCCGAGATGGCCAAGGATGGCAATCAACTGCGCGGGGAAGTGGATTATTCTGAAACAACACCTCGGATGAGAGACTTGCAGGATTTTGGGCTCAGAATTCACCCTGCAAAAAAGAAGCTTCCATCTTTTGTTGATCCTAACATTTATCAGAAACGTACGGTTGATGATGGTGCTCGGGCTCTTGCCAGCGGTGGTATACGCGCTGGGAGTAGTCTTCACATCAATGGGGCTGGGCAAATAGGAGCTTCACGAGCAAAAAGGAGCAGATGTGTGTATTTACCGACCGAGTCCAGTGATTCTCTTGATTACAGAGAGACTCTACCCCGAGTTGAGATGTCACCTTCCCAACGCAGAAGGGAGTTTCCTTATCACGGTTCTATGGTTGGAGAGACTGGATATACTTTTATGGATGATGTTGAATCTGATTCTTCTGAGACAGCTTGTACTGATTCTGATTCTGATTCTGATTCTTCTGAGACAGAACCAGACTTGGATGAAGAGATGACAATATTTTCAGAAAATGGTCATGATGCTGAAGAACACGAAAGCACTAGCAGTGAGGAGCTTGATGAATTAGCAAATTCCAGTGACATGCCTCACCTTTATCCTCGTGACTTAATAACATCTAATGAAGCTGTGTCTAAATGGCAACTAAAAGGGAAAAGGAATAATCGGAATCTTGTAAAGAGGTCTGTTGGTGCTTCTGATGGAAAATGTAATATGTATGGAGCAGGAGCAGATGTTGAAGGAAAGAGTAGTAATTTAAGGCACAATAGTCCAAGTTTGCACCGCTACAAATTTGATTTTGGTGATACCTTTGATGACGATGAGCAAAACTTTGGACTGGAAGATGAATACCCTCTATCTTCTAGATCCATATCAAGAAGTCAAAGTAAAATCCATCGTGGTGTAGCTTGGAATGATTTGGCCTGGGATGATCATCTAGCTTCTAAAAGACATTGGGATGCTAAACCATATTCTCCATTGTACGGTGACCGTTATCATTTTGGTGGTAGGGTCAGACCAATGCTAGTTAATGTAGATTTGAAGGTTCAAGCAAGCTATCGGAAAGAGTGTGTACCCTTCATTTCTCTCATGAGTAAATTAGATGGGAGGGCAATAGTAGGGCACCCAATCCAGGTTGAGGCTCTCAAGGATGGTTCATCTGATATCCTATTTCCTACAATCGATGACTTCAGTAATGATGTGACTGGTATTGAGGGAAGTAGTGTGCTACCACCAGCATGGAGGACTGCAAGGAGAACTGCAAATTTTCGCATCCCTCGCCCCCATGCGCAATCATCAAATGGTGCTGAAGGTGCGGCTGAGTTTCCCTCTTCAGATCAAGAACAAAGCTTTGAATATAAAAGTTTAAATGCTGGAAGTTCCAGTCACCAGGCTAGCCTTCAAAAGAGGAGTGGCCTTAAAAGTCATCGTTCTTCAGCAGAAAAAAGGTCCTCAAAAAAGGTGCCTAAGAAATTGAGCTTGTCATCTTGCCAAAAAACTAGAACTCTGTCCTCATTATCTACTGAGCATAATTTTAGTAGAAAGCCATTACATGATAGCAGTAGTTATCAAACAGATAGATTGACTAAACCAGACATTTCTGGGTCCACTACAGTAGCTTGCATACCAGTCCAGTTAGTGTTTAGTAGATTACTCGAGAAGATTAATAGGCCTCCATTGAAAACACCTAGTAATGTGGCTTTGCTGAATACTGGTGTGGATAGGAATTCATAG 2226 0.442 MMDCGVGSIVWVRRRNGSWWPGQILGPDDLSASHLTSPRSGTPVKLLGREDASVDWYNLEKSKRVKAFRCGEFDDCIEKAESAQGGPLKKREKYARREDAILHALELEKQILKKQGRSGARPSNTFKKGVFASPPETLGNDNENHASSFMYCESESAGGFFPPEMAKDGNQLRGEVDYSETTPRMRDLQDFGLRIHPAKKKLPSFVDPNIYQKRTVDDGARALASGGIRAGSSLHINGAGQIGASRAKRSRCVYLPTESSDSLDYRETLPRVEMSPSQRRREFPYHGSMVGETGYTFMDDVESDSSETACTDSDSDSDSSETEPDLDEEMTIFSENGHDAEEHESTSSEELDELANSSDMPHLYPRDLITSNEAVSKWQLKGKRNNRNLVKRSVGASDGKCNMYGAGADVEGKSSNLRHNSPSLHRYKFDFGDTFDDDEQNFGLEDEYPLSSRSISRSQSKIHRGVAWNDLAWDDHLASKRHWDAKPYSPLYGDRYHFGGRVRPMLVNVDLKVQASYRKECVPFISLMSKLDGRAIVGHPIQVEALKDGSSDILFPTIDDFSNDVTGIEGSSVLPPAWRTARRTANFRIPRPHAQSSNGAEGAAEFPSSDQEQSFEYKSLNAGSSSHQASLQKRSGLKSHRSSAEKRSSKKVPKKLSLSSCQKTRTLSSLSTEHNFSRKPLHDSSSYQTDRLTKPDISGSTTVACIPVQLVFSRLLEKINRPPLKTPSNVALLNTGVDRNS 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00253 741 MobiDBLite consensus disorder prediction 331 345 - -
Phco9g00253 741 MobiDBLite consensus disorder prediction 305 330 - -
Phco9g00253 741 Gene3D - 2 116 - -
Phco9g00253 741 CDD PWWP 7 83 - -
Phco9g00253 741 MobiDBLite consensus disorder prediction 588 693 - -
Phco9g00253 741 MobiDBLite consensus disorder prediction 302 364 - -
Phco9g00253 741 MobiDBLite consensus disorder prediction 114 138 - -
Phco9g00253 741 SUPERFAMILY Tudor/PWWP/MBT 5 110 - -
Phco9g00253 741 PANTHER T17B22.17 PROTEIN-RELATED 2 729 IPR044679 -
Phco9g00253 741 MobiDBLite consensus disorder prediction 654 693 - -
Phco9g00253 741 ProSiteProfiles PWWP domain profile. 6 61 IPR000313 -
Phco9g00253 741 MobiDBLite consensus disorder prediction 601 637 - -
Phco9g00253 741 Pfam PWWP domain 7 87 IPR000313 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00253 Phco-Chr9 1673136 1676530 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00253 9 1673136 1676530 Phco9g00253 9 1673136 1676530 ECH