Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00236 ATGAGTGACAATTTGATGGGAAGAGTCAACGCTTTGGGGGAGCGTCTCAAAATTGGTGGAGCTGAGGTGGGTCGGAAGATGAGTGCTGGAATGAGTTCTGTGAGCTTCAAAGTGAAAGAGTTTTTCCAGGATTCAAGCCATGCTGATAAACTCGTTGGGGAAGCTACCTCTGAGGCCCTTCATCACCCGCACTGGCCCATCATTCTTCATCTATGTGACTTGATCAATGGTGATCAACTCAACACTGCTGAAGTGGTGCGTGCAATAAAGAAACGGGTTGTTTCCAAGAGTCCTAGAAGTCAGTATCTGGCTCTGGTTCTGCTTGAAGCATTGGTCAAGAACTGTGACAAGGCTTTCTTGGAGGTGGCAACTGAGAGAGTCCTTGAAGAGATGGTCAAGCTCATTGATGACCCTTATACTTTTGTTAATAACCGGAATAAGGCTTTGATGATGATTGAGGCATGGGGAGAGTCAACCATTGAACTTCGCTACCTGCCTGTCTATGCACAAACTTACAAGAGTTTGAAATCAAGGGGTATTCGATTCCCTGGTCGTGACAACGAAAGTTTGGCTCCTATTTTCACTCCACCTCGTTCTGGCACTACTCCAGAGGCAGTTGCCAATCTTGAACATCTTGTGCAGCATGACATTCATGCGCAAAGTTTTTCCCCTGTTACTCCTCCTTCTGCCCCTACTTCAGAGGCTGATGTCAGTCTTGCACAACTTATGCAGCATGATGTTCATGTGAAAAGTTTTACGTCTCAACAAGCAAAGGAAGCTTTTGATGTTGCGAGAAATAGCTTTGAGCTTCTTTCTACCGTGTTATCTTCTTCAATGCAGCAGGACCTTTTAAAGGATGATTTGATTACCACATTAGTAAAACAGTGCCGTGAGTCCCAGACTACTGTCCATGGAATCATTGAAACTTCTTGGGATAATGAAGTACTGCTATGTGAGGCCTTGAATATAAATGATGAGATTCAGAAGGTTGTCTCCAGATATGAAGAAATGAAGAAGAAGAAGAAGCATAGAGTTGTTCCACCTGAACCTGAAGTGGGTATGGCACCTATTGCCATAGAAGCTGATGAGTCACCCCATTTTACAGAAGAGGAGGCCCTGGTTAGAAAGAGTGGAGGTTCAAGAACTGGAGTCCAGCGAGGGAGCCAGGATGAGATGTTGGATGATCTTGATGAGATGATATTTGGGAAAAAGGTTGGGGATGGATTTGATTGGGGACAGTATCCAAAGAAACAACAATCATCTGAAGATCATCTCATCTCCTTCTAA 1287 0.4437 MSDNLMGRVNALGERLKIGGAEVGRKMSAGMSSVSFKVKEFFQDSSHADKLVGEATSEALHHPHWPIILHLCDLINGDQLNTAEVVRAIKKRVVSKSPRSQYLALVLLEALVKNCDKAFLEVATERVLEEMVKLIDDPYTFVNNRNKALMMIEAWGESTIELRYLPVYAQTYKSLKSRGIRFPGRDNESLAPIFTPPRSGTTPEAVANLEHLVQHDIHAQSFSPVTPPSAPTSEADVSLAQLMQHDVHVKSFTSQQAKEAFDVARNSFELLSTVLSSSMQQDLLKDDLITTLVKQCRESQTTVHGIIETSWDNEVLLCEALNINDEIQKVVSRYEEMKKKKKHRVVPPEPEVGMAPIAIEADESPHFTEEEALVRKSGGSRTGVQRGSQDEMLDDLDEMIFGKKVGDGFDWGQYPKKQQSSEDHLISF 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00236 428 PANTHER TOM1-LIKE PROTEIN 1 1 427 IPR044836 GO:0035091|GO:0043130|GO:0043328
Phco9g00236 428 Pfam GAT domain 265 339 IPR004152 GO:0035091|GO:0043130
Phco9g00236 428 SUPERFAMILY ENTH/VHS domain 44 183 IPR008942 -
Phco9g00236 428 PIRSF TOM1 32 424 IPR014645 -
Phco9g00236 428 ProSiteProfiles GAT domain profile. 252 339 IPR004152 GO:0035091|GO:0043130
Phco9g00236 428 Coils Coil 320 340 - -
Phco9g00236 428 CDD VHS 48 177 - -
Phco9g00236 428 Gene3D - 39 200 IPR008942 -
Phco9g00236 428 SMART VHS_2 48 179 IPR002014 GO:0035091|GO:0043130
Phco9g00236 428 Gene3D - 236 341 IPR038425 -
Phco9g00236 428 SUPERFAMILY GAT-like domain 180 340 - -
Phco9g00236 428 ProSiteProfiles VHS domain profile. 55 183 IPR002014 GO:0035091|GO:0043130
Phco9g00236 428 Pfam VHS domain 46 179 IPR002014 GO:0035091|GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00236 Phco-Chr9 1549251 1551079 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00236 9 1549251 1551079 Phco9g00236 9 1549251 1551079 ECH