Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00234 ATGGCGGTGAGATCGGTGAAAGTGAGCAACATCTCTTCAGGTGCAACCGAGCAAGATTTGAGGGAATTTCTTACATTTCCCGGGAAAATTGAATACATTGAAATGCAAAGTGACAAGGGAAGTCCCCAAGTTGCTTATGTTACCTTCAGTAATCCAGAGGGAGCAGAAACTGCAGTTCTTCTCTCGGGAGCAGTTGTGTGTGGACAGTCTCTGAACATTGATTTGGCTAAGGATTATGCGTTGCCTGCCACGGCTGCATCTGCAGCAACACAACAGACTACTAACGCTGAGAGTGGGGAATCTGGTTTGAGGAAGGCGGAGGATGTTGTAACCAGCATGGTAGCCAAGGGCTTCATTTTGGGTAAAGATGCATTGAATAGAGCAAAATCCTTTGATGAAAGGCACCAGCTTACTTCCACAGCCACAGCAAAAGTTGCTTCTTTGGACCAGAAGGTTGGTTTTACTGAAAAGATCAGTGCTGGTACAGTTATGATGAATGACAAGGTGAAAGAAATGGATGAGAAATTTCAAGTCTCAGAGAAGACTAAATCTGCAATTTCAGTAGCTGAGCAGTCGGTGTCTAATGCTGGATCTGCCATAATGAAGAATCGGTATGTGTTGACTGGGGCTACATGGGTCACAGGTGCTTACAACAGGGTTGCTAAGGCAGCTGAGGAAGTGGGACAGAAAACTAAGGAGAAGGTTTTGGCGCAGGATAATCAAGGAAAGACTGAACAAGGTAATGTCCAAACCACCAGGTCGGTACCCACCACACCTGATCAAACCTCCAAACAAGCAACCACAGGCAATGAACCCTCAAAACCTGAACCTCAACAGGCCACCACAGTTGATCAAACCTCAAAATCTGAAACTCAGCAGGCCACCACAGTTAATGAACCCTCCAAACCTGAACCTCAAGTGGCCACCACAGTTAACGAACCATCCAAATCTGAACCTCAAGTGGCCACCACAGTTAACGAACCCTCCATACCTGAACCTCAACAAGCAACCAAGGATGGTCAATCTCCCAGTCCTGCAACAACTAAAGCCTGA 1053 0.4644 MAVRSVKVSNISSGATEQDLREFLTFPGKIEYIEMQSDKGSPQVAYVTFSNPEGAETAVLLSGAVVCGQSLNIDLAKDYALPATAASAATQQTTNAESGESGLRKAEDVVTSMVAKGFILGKDALNRAKSFDERHQLTSTATAKVASLDQKVGFTEKISAGTVMMNDKVKEMDEKFQVSEKTKSAISVAEQSVSNAGSAIMKNRYVLTGATWVTGAYNRVAKAAEEVGQKTKEKVLAQDNQGKTEQGNVQTTRSVPTTPDQTSKQATTGNEPSKPEPQQATTVDQTSKSETQQATTVNEPSKPEPQVATTVNEPSKSEPQVATTVNEPSIPEPQQATKDGQSPSPATTKA 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00234 350 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 4 78 IPR000504 GO:0003723
Phco9g00234 350 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 7 70 IPR000504 GO:0003723
Phco9g00234 350 Gene3D - 2 81 IPR012677 -
Phco9g00234 350 MobiDBLite consensus disorder prediction 240 350 - -
Phco9g00234 350 SUPERFAMILY RNA-binding domain, RBD 3 79 IPR035979 GO:0003676
Phco9g00234 350 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 4 244 - -
Phco9g00234 350 MobiDBLite consensus disorder prediction 235 350 - -
Phco9g00234 350 SMART rrm1_1 5 74 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00234 Phco-Chr9 1540458 1543006 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00234 9 1540458 1543006 Phco9g00234 9 1540458 1543006 ECH