Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00230 ATGGCTTCAAAATCTAGACCCAATCTATCTGAAAATCCCAGCAAAGGATCAATGGCAGCTCCTAGAGTCAGTAAAGCTAGCAAAGTGGTGTCCAAATCAGAATCTGAGTCACCATCCCCTTTGCAAAATTCGCGACTTTCTGTGGAACGATCTCCACGATCTGTTAATTCAAAGCCAACGATTGAGCGGAAATCACCAAGACCCTCCGCCACCCCACCTGATAAACAACCCCCCAGAGCTGCAAAGGGTTCAGAGTTGCAGAACCAATTGAATCTTGCTCAAGAAGACCTAAAGAAAGCAAAGGAGCTGCTCATTCAAGCTGAGAAGGAGAAGCTAAAAGCAATTGATGAGTTGAAAGAGGCACAGAGAGTGGCTGAGGATGCAAATGACAAACTCAGGGAAGCATTGGTGGCTCAAAAACGTGCTGAGGAGAATTCTGAGATTGAGAGATTCCGAGCTGTGGAATTGGAGCAGGCAGGTATTGAAACTGTGAAGAAGAAGGAAGAAGAATGGCAGAAGGAGATTGAAAGTGTCAAGAACCAACATGCTTTGGACATGGCTGCTCTTCTCTCCACCACGCAGGAGCTTCAGCGGGTTAAACAAGAACTTGCCATGACTTGTGATGCAAAGAACCAGGCATTGAATCATGCTGATGATGCAACTAAAATTGCCGAGATTCAGGCAGAGAAAGCGGAGTTTTTATCAGTTGAATTGATGCGATTGAAGACCTTACTAGATGCAAAACTCGAAACAGAGGGTGGTGAAAATCAGGTTATATTGAAACTGAAAACAGAGATATCAGCTCTAAATGATGAACTTGAAAAAGCAAAGGGTTACAACGATAAGTTGTCAGAGAAAGAGACTTTTATTGAACAGCTTAATGTGGAGCTTGAAGCTTCAAAAATGGCTGAATCTTATGCCCGTAGCCTGCTAGAGGAGTGGAATAAGAAGGTTGAGGAACTGGAAATGAGAATTGAAGAAGCAAACAAACTGGAGAGATCTGCATCAGAGTCTTTGGAATCTGTAATGAAACAGCTAGAAGGAAGCAATGATTTGTTGCATGAAGCAGAATCTGAAGTTACTACTCTTAAAGAGAAGGTAGGATTATTAGAAATGACAATTGGGAGACAGAGAGCTGATGTTGAGGATTCAGAACGCCAACTTCGCACGGCCAAGGAAGAAAGTCTTGAAAAGTCAAAGGAAGTTGAGGCTCTGAAGTCTGAAATTGAGAAGGTTAAGGAAGAGAAAGCCCAGGCTTTGAACGATGAAAAACTTGCTGCTTCTAGTGTGCAGACCTTATTAGAAGAGAAAAACAAACTTATCAGTGAATTGGAGAATTCTAGGGATGAAGAAGAAAAGAGTAAAAAGGCAATGGAAAGCTTAGCTTCTGCATTACATGAAGTATCTGCAGAAGCCAGAGAAGCTAAGGAAAATCTACTAAACACCCAAGCTGAACGTGAAAGCTATGAGGCTCAGATTGAAGATTTGAAGTTAGTATTAAAAGCCACTAATGAAAAATATGAGTCCATGCTCGATGAGGCACGACATGAGATTGATGTTCTTGTATGTAGTATTGAAAATTCTAAGAGTGTCTTTGAGAACTCCAAGGTTGAGTGGGAGCAGAGAGAGCTTCATCTAGTCAGCTGCATAAAGAAAAATGAAGAAGAGAAGGTATCTCTGGAAAAAGAAATAAAAAGATTGCTTTATTTGCTTAAAGAAACCGAAGAAGAAGCTAATATCAACAGGGAGGAAGAAGCTCAGTTGAAGGAAAATTTGAAGGAAGTTGAGGCTGAGGCAATTCAACTGCAGGAAGCTCTAAAGGAAGCAACAGCTGAGAACATGAAATTGAAGGAGAATTTATTGGATAAAGAAAATGAGTTGCAGAGTATGTTTGAAGAAAATGATGAACTTCGGATCAGGGAATCTGAATCTATCAAGAAGGTGGAGGAGTTATCTAAGTTGTTGGAAGAAGCTACAACCATAAACCACACTGAGGAAAATGGGGATCTTACTGACAGTGAGAAAGACTATGATTTGCTTCCTAAAGTAGTTGAATTTTCTGAAGAGAATGGACATGTAGGAGAGGACATTTCAAAGGTAGAGCTGTCAGTGAATCAGGAGGAACTCGAACAAAACATACCAGAAGAAAGCATTCTGTCGAACGACAAGGCTCAAAATATTGCATCTCCCAAACCTGAGGAAGTGAGTGAAAAAGTGAAGGAAGATGAGACCAAAGAAAAGGAGGATTCAGAAGAAGTTGAATTTAAAATGTGGGAGAGCTGCAAGATAGAGAAAAAGGAGGTCTCTCCGGAGAGAGAAGCAGAACCTGAATCACTTGAAGAGGAAGTTGACTCAAAGCTAGAAGAAGGCGGTGAGAGCTTTGATAAGATAAATGGAAATGCTGTAACAGAGAACAATGATGAGGGTGGGAGTCCACCACCAAAACAACAACAATTGAAGAAGAAGAAAAAGCCTTTACTTGGCAAGTTTGGAAGCCTGCTCAAGAAAAAGGGTGCTGCTGGCAACCAGAAATAG 2535 0.4122 MASKSRPNLSENPSKGSMAAPRVSKASKVVSKSESESPSPLQNSRLSVERSPRSVNSKPTIERKSPRPSATPPDKQPPRAAKGSELQNQLNLAQEDLKKAKELLIQAEKEKLKAIDELKEAQRVAEDANDKLREALVAQKRAEENSEIERFRAVELEQAGIETVKKKEEEWQKEIESVKNQHALDMAALLSTTQELQRVKQELAMTCDAKNQALNHADDATKIAEIQAEKAEFLSVELMRLKTLLDAKLETEGGENQVILKLKTEISALNDELEKAKGYNDKLSEKETFIEQLNVELEASKMAESYARSLLEEWNKKVEELEMRIEEANKLERSASESLESVMKQLEGSNDLLHEAESEVTTLKEKVGLLEMTIGRQRADVEDSERQLRTAKEESLEKSKEVEALKSEIEKVKEEKAQALNDEKLAASSVQTLLEEKNKLISELENSRDEEEKSKKAMESLASALHEVSAEAREAKENLLNTQAERESYEAQIEDLKLVLKATNEKYESMLDEARHEIDVLVCSIENSKSVFENSKVEWEQRELHLVSCIKKNEEEKVSLEKEIKRLLYLLKETEEEANINREEEAQLKENLKEVEAEAIQLQEALKEATAENMKLKENLLDKENELQSMFEENDELRIRESESIKKVEELSKLLEEATTINHTEENGDLTDSEKDYDLLPKVVEFSEENGHVGEDISKVELSVNQEELEQNIPEESILSNDKAQNIASPKPEEVSEKVKEDETKEKEDSEEVEFKMWESCKIEKKEVSPEREAEPESLEEEVDSKLEEGGESFDKINGNAVTENNDEGGSPPPKQQQLKKKKKPLLGKFGSLLKKKGAAGNQK 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00230 844 MobiDBLite consensus disorder prediction 1 17 - -
Phco9g00230 844 MobiDBLite consensus disorder prediction 708 844 - -
Phco9g00230 844 Coils Coil 550 640 - -
Phco9g00230 844 MobiDBLite consensus disorder prediction 1 93 - -
Phco9g00230 844 Coils Coil 311 422 - -
Phco9g00230 844 MobiDBLite consensus disorder prediction 733 773 - -
Phco9g00230 844 MobiDBLite consensus disorder prediction 774 788 - -
Phco9g00230 844 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 13 837 - -
Phco9g00230 844 MobiDBLite consensus disorder prediction 378 402 - -
Phco9g00230 844 Coils Coil 259 286 - -
Phco9g00230 844 Coils Coil 427 517 - -
Phco9g00230 844 Coils Coil 83 145 - -
Phco9g00230 844 MobiDBLite consensus disorder prediction 798 813 - -
Phco9g00230 844 MobiDBLite consensus disorder prediction 708 727 - -
Phco9g00230 844 Coils Coil 161 181 - -
Phco9g00230 844 MobiDBLite consensus disorder prediction 28 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00230 Phco-Chr9 1511441 1514918 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00230 9 1511441 1514918 Phco9g00230 9 1511441 1514918 ECH