Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00225 ATGTCTCTCTCTCTTCTTCCTGTATACTCTTCACCTCACCTCTCCCCCTCTCTCTCCTTTCCTACACCGCAGCTTTCTTTCCTTTGCTTCTCCAAATTATCAAACGCCCCTACTCCCCACTTTATTCTATGCTGCCGCAGGAACGCTTCATTTTCCGCCCGATGTGGGCCTGGAGTCCCTGAGGGTGCTCAACACGACAGTGGTATCGAAGAAGATGATGAACAACCCATGAAGGCTAGTTGCGACGACGACGAAGAGGAAGAAGGCCAAGAGACTCTTAGCTCCTTAGTTTTGCCTGAAAGATGGGATGTCTTGGGTCTCGGTCAGGCCATGGTGGACTTCTCTGGCATGGTTGATGATAATTTTCTGGAGAATTTGGGGTTAGAGAAGGGAACGCGGAAAGTAGTAAATCATGAGGAAAGAGGTAGAGTTTTGCAGGCTATGGATGGGTGCAGCTATAAAGCTGCTGCTGGTGGGTCTCTTTCTAATACCTTAGTTGCCCTTGCAAGGCTTGGAAGTCGCTCTGTCAAAGTTCCTGCTATAAATGTGGCAATGACCGGTAGTGTAGGGAGTGATCTGTTGGGGGGTTTCTACAGGGAAAAATTGCGACGAGCAAATGTGCAATTTCTTTCCGAGCCTATCAAGGATGGGACAACTGGAACAGTTATAGTTCTCACAACTCCAGATGCCCAGCGCACAATGCTTGCATATCAGGGCACATCTTCAACTGTTAACTATGATGCATCCTTGGCTAGTGCAGTTTCCAAAACCAACATACTTGTTGTTGAAGGGTATTTATTTGAACTTCCTGATACTATTAAAACAATAACCAAAGCATGTGAGAAAGCTCGGAGGAATGGTGCCTTGGTTGCAATAACAGCTTCAGATGTTTCCTGCATTGAGAGGCACTTCGATGATTTTTGGGAATTTATTGGGAACAGTGTGGATTTGGTGTTTGCAAATGGTGATGAGGCCAGAGCTCTTTGTAATTTTGAAGCAAAGGAAAGTGCTGCTTCAGCTGCAAGGTATCTGAGCCATTTTGTTCCTCTAGTGTCCGTTACAGATGGTCTTAGAGGTTCTTACATAGGTGTAAAAGGAGAAGCTGTATATATCCCTCCTTCTCCATGTGTTCCAGTGGATACTTGTGGTGCTGGCGATGCATATGCATCTGGCATACTATATGGTCTCTTAAGAGGCATATCAGATTTGAGAAGTACAGGCACATTTGCAGCTAATGTTGCTGCCACGGTTGTTGGACAACAGGGAACACGCCTTAGAATTTCAGATGCAGTCAAATTGGCTGAATCTTTCGAATTTCAACTTGATTCCTCTTCCTCTTCCTCTTCGGTTGGCACTGATCATATTTCCAGCTTCTAA 1377 0.4546 MSLSLLPVYSSPHLSPSLSFPTPQLSFLCFSKLSNAPTPHFILCCRRNASFSARCGPGVPEGAQHDSGIEEDDEQPMKASCDDDEEEEGQETLSSLVLPERWDVLGLGQAMVDFSGMVDDNFLENLGLEKGTRKVVNHEERGRVLQAMDGCSYKAAAGGSLSNTLVALARLGSRSVKVPAINVAMTGSVGSDLLGGFYREKLRRANVQFLSEPIKDGTTGTVIVLTTPDAQRTMLAYQGTSSTVNYDASLASAVSKTNILVVEGYLFELPDTIKTITKACEKARRNGALVAITASDVSCIERHFDDFWEFIGNSVDLVFANGDEARALCNFEAKESAASAARYLSHFVPLVSVTDGLRGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGLLRGISDLRSTGTFAANVAATVVGQQGTRLRISDAVKLAESFEFQLDSSSSSSSVGTDHISSF 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00225 458 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 380 393 IPR002173 GO:0016301
Phco9g00225 458 PANTHER SUGAR KINASE 99 435 - -
Phco9g00225 458 SUPERFAMILY Ribokinase-like 102 425 IPR029056 -
Phco9g00225 458 FunFam Putative sugar kinase slr0537 105 429 - -
Phco9g00225 458 Pfam pfkB family carbohydrate kinase 153 425 IPR011611 -
Phco9g00225 458 MobiDBLite consensus disorder prediction 76 91 - -
Phco9g00225 458 CDD adenosine_kinase 101 426 - -
Phco9g00225 458 Gene3D - 98 432 IPR029056 -
Phco9g00225 458 MobiDBLite consensus disorder prediction 59 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00225 Phco-Chr9 1483717 1487697 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00225 9 1483717 1487697 Phco9g00225 9 1483717 1487697 ECH