Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00220 ATGGCTGCTGCTGACAACACCAACCATCCTAAGGATTATTACAAAGTGCTGGAGGTTGATTATGATGCAACTGATGAAAATATCAAATTAAATTACCGAAGACTCGCGTTGAAATGGCATCCTGACAAGCACGGAGGTGATAGTGATGTTACTGCAAAATTTCAAGAGATAAATGAAGCTTACAATGTATTAAGTGATCCTGCCAAGCGTTTTGACTATGATTTAACGGGTATATGCGAGATTGAAAAATATAGTTTACAGGAATATCTTGCCAGATTTAAAGGGATGATTCTTACCTGCAATGGCCTTGGTATCGATCAAACAGACAGATGGTCACCACAATTGATTGAAAATTTTGAATCCCTAGATAAATAA 375 0.3707 MAAADNTNHPKDYYKVLEVDYDATDENIKLNYRRLALKWHPDKHGGDSDVTAKFQEINEAYNVLSDPAKRFDYDLTGICEIEKYSLQEYLARFKGMILTCNGLGIDQTDRWSPQLIENFESLDK 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00220 124 ProSiteProfiles dnaJ domain profile. 12 77 IPR001623 -
Phco9g00220 124 SMART dnaj_3 11 69 IPR001623 -
Phco9g00220 124 CDD DnaJ 12 66 IPR001623 -
Phco9g00220 124 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 108 - -
Phco9g00220 124 Pfam DnaJ domain 12 74 IPR001623 -
Phco9g00220 124 Gene3D DnaJ domain 2 93 IPR036869 -
Phco9g00220 124 FunFam Chaperone protein DNAj, putative 4 91 - -
Phco9g00220 124 PRINTS DnaJ domain signature 14 32 IPR001623 -
Phco9g00220 124 PRINTS DnaJ domain signature 49 69 IPR001623 -
Phco9g00220 124 PRINTS DnaJ domain signature 32 47 IPR001623 -
Phco9g00220 124 SUPERFAMILY Chaperone J-domain 9 97 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00220 Phco-Chr9 1447230 1450407 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00220 9 1447230 1450407 Phco9g00220 9 1447230 1450407 ECH