Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00218 ATGTCAACAACCTCGCAGGTTATCACATGCAAAGCTGCGATATGCTGGGGATTAGGACTACCTGTTACAGTGGAAGAGATTCAAGTTGATCCACCAAAAGCAACTGAAGTTCGAGTTAAGGTGCTTTGTGCAAGTATCTGCCACACAGACATAACAAGCCTTCAAGGATTCCCACATATGAGTTTTCCTCTAGCACTTGGGCATGAAGGAGTTGGTGTTGTAGAGAGTGTTGGTGATGAAGTGACAACCCTTAAAGAGGGGGATGTAGTGATCCCAACATATATAGGGGAGTGTGAAACATGTGAGAATTGTGTTTCTGGAAAAACAAATTTATGTCTGACACACCCTGTGAGGTTGAATGGTTTGCTACCAGATAACACTTCAAGGATGTCCGTAAGAGGACAGAGGCTGTACCATGTTTTAAGCTGTGCTACATGGTCAGAATACTTCGTTAGTGATGTCAATTACACTGTCAAAGTTGATCCAGCCATTGATCCAGCACATGCAAGTTTCATCTCATGTGGGTTTTCAACTGGGTTTGGAGCTGTTTGGAAAGAAGCCAAGGTTGAAAGTGGATCCAGTGTAGCTGTTCTTGGTCTTGGGGCTGTTGGATTAGGGGCTATAAGTGGAGCCAAAATTATGGGAGCAAGTAAGATAATTGGAATTGACAAAAATGAGAAGAAGAGGGAAAAAGGAGAGGCTTTTGGAATGACCCAGTTTATAAATCCTGGTGATTCTGCTAAATCTGTTTCAGAATTGGTTAAGGAAGTAACTGGTGGAATGGGTGTGGATTATTCCTTTGAGTGCACTGGAATTCCCCCTTTGCTTGCTCAATCATTGGAAGCCACAAAAATGGGAACGGGTAAAACAATTGTAGTTGGAATACCAGCAGAACCTATTGTGTCGTTGGGTGTGTCACCCCTTCTTGTCGGTAGAACCATGAAAGGTTCAGTTTTTGGAGGTCTCAAAGTTAGATCTGATATGGCCATAGTAGCTAACAAATGCCTAAAAAAGGAATTCCCTCTTGAAGAACTATCCACACATGTGGTCCCATTAGAAGATATTAGCAAAGGATTTGAGATGCTGAAAGATCCCAACTGTGTGAAAGTTGTGATCAAGATATCTCATTGA 1131 0.4226 MSTTSQVITCKAAICWGLGLPVTVEEIQVDPPKATEVRVKVLCASICHTDITSLQGFPHMSFPLALGHEGVGVVESVGDEVTTLKEGDVVIPTYIGECETCENCVSGKTNLCLTHPVRLNGLLPDNTSRMSVRGQRLYHVLSCATWSEYFVSDVNYTVKVDPAIDPAHASFISCGFSTGFGAVWKEAKVESGSSVAVLGLGAVGLGAISGAKIMGASKIIGIDKNEKKREKGEAFGMTQFINPGDSAKSVSELVKEVTGGMGVDYSFECTGIPPLLAQSLEATKMGTGKTIVVGIPAEPIVSLGVSPLLVGRTMKGSVFGGLKVRSDMAIVANKCLKKEFPLEELSTHVVPLEDISKGFEMLKDPNCVKVVIKISH 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00218 376 FunFam alcohol dehydrogenase 1-like isoform X1 18 178 - -
Phco9g00218 376 CDD liver_alcohol_DH_like 8 373 - -
Phco9g00218 376 FunFam S-(hydroxymethyl)glutathione dehydrogenase 179 317 - -
Phco9g00218 376 Gene3D - 179 317 - -
Phco9g00218 376 SUPERFAMILY GroES-like 3 190 IPR011032 -
Phco9g00218 376 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 67 81 IPR002328 GO:0008270|GO:0016491
Phco9g00218 376 Pfam Zinc-binding dehydrogenase 202 326 IPR013149 -
Phco9g00218 376 Pfam Alcohol dehydrogenase GroES-like domain 35 158 IPR013154 -
Phco9g00218 376 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 164 336 IPR036291 -
Phco9g00218 376 SMART PKS_ER_names_mod 17 372 IPR020843 GO:0016491
Phco9g00218 376 Gene3D - 14 369 - -
Phco9g00218 376 PANTHER ALCOHOL DEHYDROGENASE 6 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00218 Phco-Chr9 1433998 1436373 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00218 9 1433998 1436373 Phco9g00218 9 1433998 1436373 ECH