Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00197 ATGGCGTCCTCTCTTGCTGTGAAGCGCTTCCTCTCCTCTTCTCTCCTCTCCAAGTCTCTCCTTCGTCCCGCCGCTTCCGCCTCTCGCTCTTTCAACACCATCGCCATACACTGCTACCACGACCACAACGTCGACTTCGAAAGTCGCTCAGAAAGCTCTTTTCCTCGCACCGCGCGTCGCGAAGATATCTTCTCAGACGTGCTGGTTCCGTTTTTTCCTACTCGGAGTTTGAGCCAGGTTCTGATCATGATGGATCAGTTCATGGACAATCCTTTCCTCTCTGCGCCGCGCGGTATCGGAGCCGGAGACGGAGACGTAGACGGAGTCCGTCGCGGATTGTACGTGAGAGAGACGGAAGATGCTCTGCTTCTCCGCTTGGACATGCCTGGGCTTGGAAAGGAGGACGTGAAGATCTCCGTGGAGCATAACACTCTTACTATCAAAGGTGAAGGTGCCAAAGAAGACGACGAGGAAGAGAGCGCTCCTCGCTATACTAGGATTGACTTTCCGAACAAGTTTTACAAGGTAGATCATATCAAAGCTGAGATGAAGAATGGTGTGCTGAAGGTGGTTTTGCCTAAAAAGGAGGAGGAGGAGGAGACGAAAGATGTGATCAATGTTAATGTTGAATAG 633 0.515 MASSLAVKRFLSSSLLSKSLLRPAASASRSFNTIAIHCYHDHNVDFESRSESSFPRTARREDIFSDVLVPFFPTRSLSQVLIMMDQFMDNPFLSAPRGIGAGDGDVDGVRRGLYVRETEDALLLRLDMPGLGKEDVKISVEHNTLTIKGEGAKEDDEEESAPRYTRIDFPNKFYKVDHIKAEMKNGVLKVVLPKKEEEEETKDVINVNVE 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00197 210 PANTHER 23.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 26 205 IPR044656 -
Phco9g00197 210 Pfam Hsp20/alpha crystallin family 116 209 IPR002068 -
Phco9g00197 210 SUPERFAMILY HSP20-like chaperones 80 207 IPR008978 -
Phco9g00197 210 Gene3D - 73 209 IPR008978 -
Phco9g00197 210 CDD ACD_sHsps-like 114 193 - -
Phco9g00197 210 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 104 210 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00197 Phco-Chr9 1281988 1282758 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00197 9 1281988 1282758 Phco9g00197 9 1281988 1282758 ECH