Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00188 ATGGCGCTTAAAACCCTATCCACTTTCCTCTCACCTCTTTCTCTTCCCAAATCCAAATTCCCGCAACATTTCCTCACCACCAAGCCTGGCCCCATTCTCTGCGATTTCTCGCGCTCTCAGCAATCGCGTTTGCCCGCCGCCGAATCGGAAGGAACCGGCGCCGCCGCTCCGTCGCCGGGTGAGAAGTTTCTCGAACGCCAGCAGTCGTTCGAAGCTGCCAAGCTCATCCTCAAAGAAAACAAGAAGAGAACAAAGAAGAAAGAGAGCCGTGTAAAAGCTGCTAGAAACGTCGCTTCCTGCTATGGCTGCGGCGCTCCGTTGCACACTTCTGATGCCGTCGCCCCTGGCTACGTTGATCCTGAAACCTATGAATTGAAGAAGAAACACCGCCAGCTTAGAACTGTTCTGTGTAGACGGTGCCAGCTTTTGTCGCACGGCGAGATGATAACTGCCGTTGGCGGACACGGAGGATACCCTGGCGGTAAATTATTTGTTACCGCTGAAGAGCTTCGAGAAAAGTTGTCTCACTTACGTCACGAGAAAGCTCTAATTGTCAAATTGGTTGATATTGTTGACTTCAATGGCAGTTTTTTGTCTCGTGTGCGAGATCTTGCTGGTTCTAACCCAATTATACTGGTGGTGACTAAGGTTGATCTCCTTCCAAGAGATACTGATCTTAATTGTGTCGGGGATTGGGTTGTAGAGGCTACCATGAGAAAGAAGCTGAATGTTCTCACTGTTCATCTCACCAGTTCCAAATCATTGGTTGGAGTAACTGGAGTGATATCAGAAATCCAGAAAGAGAAGAAGGGAAGAGATGTTTACATTCTGGGTTCAGCTAATGTTGGAAAATCCGCCTTCATCAATGCTTTACTAAAAACAATGGCTATAAATGATCCAGTGGCTGCATCTGCACAAAGATACAAACCAATACAATCTGCAGTTCCTGGAACTACCTTAGGGCCAATTCAAATTAATGCTTTTCTAGGAGGAGGGAAATTGTATGACACTCCTGGAGTTCATCTCCACCACAGGCAAACTGCCGTTGTTCAATCTGAAGATCTACCTTCCCTTGCTCCTCGGAGCAGACTGAGGGGCCTTTCTTTCCCAAGGTCTCTAGTATCTGCGGACAATGTAGAACAAGGAGCTTCCATTGTGAATGGTTTGAATGCATTTTCAATTTTCTGGGGAGGTCTTGTTAGAATTGATGTCTTGAAGGTTCTCCCAGAAACTTGTTTGACATTTTATGGGCCCAAGGGAATACATATCCACATGGTACCCACAGAGCAAGCAGATGAGTTTTATCAGAAAGAACTTGGTGTTCTCTTGACTCCACCTAGTGGAGGAGAAAATGTTGACAGCTGGAAAGGGCTTGAATCAGAACGTAAATTGCAAATAAAATTCGAAGATGTGGAAAGACCAGCTTGTGACATAGCTATATCAGGTCTAGGATGGTTTACTGTCGAGCCAGTTCGTAGGTCACCCAAAATCTCACAACCAAAACCTGTTGAGACTACTGGGGAATTGATTTTGGTCGTGCGAGTCCCCAAACCTGTTGAGATTTTTTTGAGGCCACCGATACCTGTAGGCAAGGCTGGAGCAGAGTGGTACCAGTATGCAGAATTAACAGAGAAAGAAGAGGAAATGAGACCGAAATGGTACTTTTGA 1668 0.461 MALKTLSTFLSPLSLPKSKFPQHFLTTKPGPILCDFSRSQQSRLPAAESEGTGAAAPSPGEKFLERQQSFEAAKLILKENKKRTKKKESRVKAARNVASCYGCGAPLHTSDAVAPGYVDPETYELKKKHRQLRTVLCRRCQLLSHGEMITAVGGHGGYPGGKLFVTAEELREKLSHLRHEKALIVKLVDIVDFNGSFLSRVRDLAGSNPIILVVTKVDLLPRDTDLNCVGDWVVEATMRKKLNVLTVHLTSSKSLVGVTGVISEIQKEKKGRDVYILGSANVGKSAFINALLKTMAINDPVAASAQRYKPIQSAVPGTTLGPIQINAFLGGGKLYDTPGVHLHHRQTAVVQSEDLPSLAPRSRLRGLSFPRSLVSADNVEQGASIVNGLNAFSIFWGGLVRIDVLKVLPETCLTFYGPKGIHIHMVPTEQADEFYQKELGVLLTPPSGGENVDSWKGLESERKLQIKFEDVERPACDIAISGLGWFTVEPVRRSPKISQPKPVETTGELILVVRVPKPVEIFLRPPIPVGKAGAEWYQYAELTEKEEEMRPKWYF 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00188 555 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 167 343 IPR030378 GO:0005525
Phco9g00188 555 PANTHER NO-ASSOCIATED PROTEIN 1, CHLOROPLASTIC/MITOCHONDRIAL 40 555 IPR044229 GO:0003924
Phco9g00188 555 Gene3D - 168 344 IPR027417 -
Phco9g00188 555 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 344 IPR027417 -
Phco9g00188 555 CDD YqeH 137 340 - -
Phco9g00188 555 Pfam 50S ribosome-binding GTPase 274 344 IPR006073 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00188 Phco-Chr9 1227172 1232671 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00188 9 1227172 1232671 Phco9g00188 9 1227172 1232671 ECH