Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00158 ATGAGCGTTATTTCACGGAACATTTGGCCGGTTTGCGGCAGCCTCTGCTGCTTTTGCCCCGCCTTGCGCGAACGCTCCCGACATCCTATCAAGCGTTACAAGAAGTTTCTCGCTGACATTTTCCCTCGCACACCGGGCGAGGAACCGAATGAGCGTATGATCGGCAAGTTATGTGAATATGCCGCAAGGAATCCTCTCCGCGTCCCTAAGATAACGAGCTATCTGGAGCAAAGGTGTTATAGGGAGTTGAGAACGGAAAACTACCAATCCGTCAAAGTTGTTATATGTATTTATAGGAAGTTGTTGATTTCTTGCAAAGACCAGATGCCTTTGTTTGCGAGTAGCTTGCTTGGCATCATACAGATTCTTCTTGATCAATCACGGCATGATGAAGTGCAGATTTTAGGTTGCCAGACTTTGTTTGACTTTGTGAACAATCAGAAGGATGGTACTTATATGTTCAATTTAGATGCGTTTATTGTAAAACTCTGCAATCTAGCTCAAGAATCTGGCGATGATGATGTCAAAATACAACAGTTACGTGCTGCTGGCCTTCAAGTCCTTTCATCAATGGTTTGGTTCATGGGAGAATTTACTCATATCTCTGTGGAATTTGACAATGTTGTTTCCGTTGTTTTAGAAAATTATGGGGATGTCCAGCAAGAGTCTCAAAATGAGAACGCAATGAGGCTTTATTCTTGGAGAACGATAGTGAATGACAAAGGAGAACTTAACGTGCCTGTGGATGACGCCCAGAAACCTGGATTTTGGTCTCGGATTTGCGTACAAAATATGGCAAAGTTAGCTAAGGAGGGTACAACAGTTCGACGTGTTCTGGAATCCTTGTTCCGCTATTTTGATAATGCCAATCTCTGGTCTCCGGAACATGGTCTTGCTCTTTCTGTTCTGCTCAACATGCAGTCTATAATTGAAAATTCTGGACAAAATACACACTTGTTACTGTCCATTTTGGTCAAGCACCTTGATCACAAGAATGTCTTAAAGAATCCTAATATGCAACTTGACATAGTTGGGGTTATTACCCATCTTGCCCAACAAACAAGGGTTCAACAGTCTGTGGCTATAATTGGTGCATTGAGTGATATGATGAGACACCTGCGGAAAAGCATACATTGCTCTCTTGATGATTCAAAATTGGGGTCTGAGATAATACAATGGAACCAAAAATACCGAACGGAAGTAGATGAATGCCTAGTACAATTAACAATTAAGATTGCAGATGCAGGTCCTATTCTTGATACCATGGCCGTGTTGTTGGAAAACATGTCTAGTATTACTGTTATGGCCAGAACCTTGATTGCTGCAGTCTATAGAACTGCTCAAATAGTTGCTTCCATACCAAATTTATCATATCAGAACAAGTCATTCCCTGAGGCATTATTTCATCAGTTACTTCTGGCAATGGTCCATGCAGACCATGAAACCAGGGTGGGTGCACACCGCGTATTTTCTGTTGTTCTCGTGCCATCTTCAGTTTGTCCTCAACCCTCCTCTTCAGAGTTCCCTACAACAAAGTCATCTGATATTCAAAGAATGCTCTCAAGAAATGTCTCTGTGTTTTCTTCTTCAGCTGCACTCTTTGAGAAATTGGAGAGGAAGCAAAATTTATTGCCAGAAGATAGTAATACAGATGCCAAGGTCAATGATAACTCCATTTTGAACAGATTGAAGTCAACTTATAGCCGGACTACTAGTTCGAGAAAATCTTCTCTGGCCAGTTCAGAATATATAGATAACAGGAACTCAAAGGGTAGTAATAATTCTTCTGTGATGAATAGATTGAAGTCTAGTTACAGCCGTGCTACCAGTATGAGGAAGTCGCAAGTAAACACAACTGCGGCGGAAAATACTACAAATACTTCCACCAAACATGTATTACCCATTCGATTGAGTAGTCATCAGATTACCCTTTTGTTATCATCAATCTGGGCCCAGTCTGTATATTCCCAAAATACGCCTGAAAATTTTGAGGCGATTGCTCATACCTACAGCCTTCTGCTGCTAGTTGCTCGGAGTAAGAATTCATCTCATGAAGCTCTAACTCAAAGTTTTCAGTTGGCTTTTTCCTTGAGGAACATTTCTCTCAATGAAAATGTAAAACTGCAACCATCTCGCCGCAGATCTCTCTTTACACTAGCAACAGCCATGATTGTCTTCACATCCAAGGCCTACAACATCCTCTCTCTCATTTCTATTGCTAAAACGACATTGACTGATAAAACAATGGATCCATTCCTACAGCTGGTTAATGATTGCAAGTTACAAGCAGTTGCTGATACAGTTAGGAAGCCAAGTAGAGTTTATGGATCAAAAGAGGACGATGAGGATGCTTTGAAGGCACTTTCAGCCATAAAGTTAACTGAGAGCCAGTCTAAAGAATCATTTTCTACCATGATTGTGCAGAGTCTTGGAATATCGTTTAATGAATCATCCATCCTACAAGAACGGCTGCTCGGCGATTTTTCACCTGATGATGCCTGTCCTTTGGGATGCCAGTTATCCAGTGAAACAACAGGGGATATGTACCAGTCTGGACTAAAAGATGATAAACTTCCTGATATGGTTGACATTTCATTATTCACTATTGACGATGACATTTCACATAGTGGTTTGGAGTCCCACGCTAATCCTGATCCACAGGAGCAGTCGTCACAAAATCTAAGCCTGTTGAGTGTTGATGACATATTGGGCTCAGTTTCGGAGACAACACATCAAGTAGGAAGAATTTCTATTTCAACACCGTTTGACATGCCTTACAAAGAAATGGCTCACCATTGTGAGGCCCTCCTCGTGGGAAAGCAGCAGAAGATGTCCACTTTCCTGAGTACTCATTCAATACAAGGATATTCATTTAGGATCCCAACTGAATACCGCCAGGAAAAGGACGGGGTGTCCTCAAACCACAATATTCTACAGGCTTTACCTTCGAGTGGAAATCCATTCTTGGATTCTAACTTCGACTCTACCTCACACAATGCATTGCCTGACACTGCTCCAAGGCCTTGTGCTACAGCATACCAGCATCAGGCTGCCTTCTTTCAACTGCCAGCCTCACGTCCGTATGATAATTTCTTGAAAGCAGCCGCTTCACTATCTCCTCTCTCTCTCTCTCTAGACTCTACTCTACTTCGATCTGAGTCGTTACACACAACAAGAACAAAACCGATCAGGTCAACTTGTGTAAAATTTTGCAGAATGGAGGAAGTTCAAGAGTCCAAAACCCAACCCTCGCCTGGTCAAGAAGATGAAAATGAAGTGATTACTGAAAGTTCAGCATTTGTTAAAGGGGAACCAGCCCCGGAGTTCAGTAGTAGCCCCCCAAAAGTTGACTCTGAAGTTGAGGTCCTTCATGAGAAGGTCGCCAAACAAATCATTAAGGAAGGCCATGGCCAGAAGCCTTCCAAATATTCAACTTGTTTCTTCCATTACAGGGCTTGGTCTGAGAAAACACAGCACAAGTTTGAAGACACATGGCTGGAGCAAAGGCCAACTGAGATGGTCTTGGGTAAAGAAAAGAAAGAAATGACTGGGTTGGGCATTGGTGTGGCAAGCATGAAAGCTGGGGAGCGTGCATTGGTGCGTGTAGGGTGGGAGTTAGGATATGGAGAGGAAGGAAGCTTTTCTTTTCCAAACGTTCCACCCATGGCAGATTTAGTTTATGAAGTTGAGCTCATTGGCTTTGACGAAACGAAAGAAGGGAAAGCTCGCAGTGATATGACTGTGGAAGAAAGGATTGGTGCAGCAGACCGGAGAAAGATGGATGGCAATGCTTTGTATCAGGATGAAAAACTAGAGGAGGCTATGCAACAGTATGAAATGGCCATAGCGTATATGGGAGATGACTTCATGTTCCAGTTGTTTGGGAAATATAGAGATATGGCTCTGGCTGTAAAGAATCCATGCCATCTTAACATGGCAGCTTGTTTGATTAAGCTGAACCGTTATGAAGAAGCTATAGGACAATGCAGCATCGTACTGGGTGAGGATGAGAACAATGTGAAGGCATTATTTAGGCGAGGTAAGGCTAGAGCAGCACTTGGGCAAACAGATGCTGCCAGGGAAGATTTTCTAAAGGCAAGGAAACAAACCCCTCAAGATAAAGCAATTGCAAGAGAATTAAAATTGCTTGCTGAACACGACAAGGCCGTTTACCAAAAGCAGAAAGAGATATATAAAGGAATATTTGGACCAAGGCCTGAACCAGTTCCTAAGCGAAGAAACTGGCTCATACTTATTTGGCAGTGGTTGCTTTCAGTATTCAATGGCCTTGTCAGCCTCTTCAAGCGTGAAAGGCTTAAATCTGACTAA 4329 0.426 MSVISRNIWPVCGSLCCFCPALRERSRHPIKRYKKFLADIFPRTPGEEPNERMIGKLCEYAARNPLRVPKITSYLEQRCYRELRTENYQSVKVVICIYRKLLISCKDQMPLFASSLLGIIQILLDQSRHDEVQILGCQTLFDFVNNQKDGTYMFNLDAFIVKLCNLAQESGDDDVKIQQLRAAGLQVLSSMVWFMGEFTHISVEFDNVVSVVLENYGDVQQESQNENAMRLYSWRTIVNDKGELNVPVDDAQKPGFWSRICVQNMAKLAKEGTTVRRVLESLFRYFDNANLWSPEHGLALSVLLNMQSIIENSGQNTHLLLSILVKHLDHKNVLKNPNMQLDIVGVITHLAQQTRVQQSVAIIGALSDMMRHLRKSIHCSLDDSKLGSEIIQWNQKYRTEVDECLVQLTIKIADAGPILDTMAVLLENMSSITVMARTLIAAVYRTAQIVASIPNLSYQNKSFPEALFHQLLLAMVHADHETRVGAHRVFSVVLVPSSVCPQPSSSEFPTTKSSDIQRMLSRNVSVFSSSAALFEKLERKQNLLPEDSNTDAKVNDNSILNRLKSTYSRTTSSRKSSLASSEYIDNRNSKGSNNSSVMNRLKSSYSRATSMRKSQVNTTAAENTTNTSTKHVLPIRLSSHQITLLLSSIWAQSVYSQNTPENFEAIAHTYSLLLLVARSKNSSHEALTQSFQLAFSLRNISLNENVKLQPSRRRSLFTLATAMIVFTSKAYNILSLISIAKTTLTDKTMDPFLQLVNDCKLQAVADTVRKPSRVYGSKEDDEDALKALSAIKLTESQSKESFSTMIVQSLGISFNESSILQERLLGDFSPDDACPLGCQLSSETTGDMYQSGLKDDKLPDMVDISLFTIDDDISHSGLESHANPDPQEQSSQNLSLLSVDDILGSVSETTHQVGRISISTPFDMPYKEMAHHCEALLVGKQQKMSTFLSTHSIQGYSFRIPTEYRQEKDGVSSNHNILQALPSSGNPFLDSNFDSTSHNALPDTAPRPCATAYQHQAAFFQLPASRPYDNFLKAAASLSPLSLSLDSTLLRSESLHTTRTKPIRSTCVKFCRMEEVQESKTQPSPGQEDENEVITESSAFVKGEPAPEFSSSPPKVDSEVEVLHEKVAKQIIKEGHGQKPSKYSTCFFHYRAWSEKTQHKFEDTWLEQRPTEMVLGKEKKEMTGLGIGVASMKAGERALVRVGWELGYGEEGSFSFPNVPPMADLVYEVELIGFDETKEGKARSDMTVEERIGAADRRKMDGNALYQDEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLIKLNRYEEAIGQCSIVLGEDENNVKALFRRGKARAALGQTDAAREDFLKARKQTPQDKAIARELKLLAEHDKAVYQKQKEIYKGIFGPRPEPVPKRRNWLILIWQWLLSVFNGLVSLFKRERLKSD 1442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00158 1442 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 1143 1235 IPR001179 GO:0003755
Phco9g00158 1442 ProSiteProfiles TPR repeat profile. 1340 1373 IPR019734 GO:0005515
Phco9g00158 1442 SUPERFAMILY FKBP-like 1117 1241 - -
Phco9g00158 1442 PANTHER PUTATIVE, EXPRESSED-RELATED 1 1036 - -
Phco9g00158 1442 SUPERFAMILY ARM repeat 53 678 IPR016024 -
Phco9g00158 1442 Gene3D Tetratricopeptide repeat domain 1237 1368 IPR011990 GO:0005515
Phco9g00158 1442 FunFam Peptidylprolyl isomerase 1240 1369 - -
Phco9g00158 1442 Gene3D - 1111 1236 IPR046357 GO:0003755
Phco9g00158 1442 SMART tpr_5 1340 1373 IPR019734 GO:0005515
Phco9g00158 1442 SMART tpr_5 1255 1288 IPR019734 GO:0005515
Phco9g00158 1442 SMART tpr_5 1306 1339 IPR019734 GO:0005515
Phco9g00158 1442 SUPERFAMILY TPR-like 1247 1396 IPR011990 GO:0005515
Phco9g00158 1442 MobiDBLite consensus disorder prediction 570 625 - -
Phco9g00158 1442 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 1139 1232 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00158 Phco-Chr9 1041423 1054494 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00158 9 1041423 1054494 Phco9g00158 9 1041423 1054494 ECH