Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00097 ATGGACTTGAAGTCAAATCATACTCCTGTTCTCACTGATTCTGCACCCGTAACAAATTCTAGGCTGTGCGTGCATTCCAGTTTGTTGCCTTACTCCCATTCCGGGGCAACCTTTACGCACGGAATGTTACTGACTATCCCGAGGAAGAAGACAGGAATTCTTGAAGATGTTCGTTCTAGTGGTTGGTTGGATGCCATGAAATCATCTTCACCTCCAGCCAGAAAGATAACAAAGGATGTCAGCCATGGGTTTGCATCATCTGATTCTGATACTTCTGGTGCTTATTTTAGCTGGCTGCTAAAATACCCATCTGCGCTTACATGTTTTGATCAAATCACAAACTATGCAAAAGGGAAAAGAATTGCATTGTTTATGGATTATGATGGAACTCTTTCCCCAATTGTGGATAATCCTGACTGTGCGTTCATGTCGGACAATATGCGTGCTTCTGTTAAAAAGGTGGCGGAATATTTTCCAACAGCAATAATTAGTGGAAGAAGTCGTGACAAGGTATATCAATTTGTAGGACTAACCGAACTCTACTACGCTGGTAGTCACGGGATGGACATCATTGGTCCTGTTAGACAATCTGAATCTGATAATCACCCAAATTGCATTAGGTCTACAGACAAGCAGGGTAAGGAAGTAAATTTATTCCAACCTGCTGCGGAATTTCTGCCCATGATTAATGAGGTCCTTAAGTCTCTTGATGAGTGTACGAAAGACATTAAAGGTGCTAAAGTAGAGAACAATAAATTTTGCGTATCTGTGCACTACCGGAATGTTGATGAAAAGTATTGGGATGTGGTGGGGCAACGTGTTCATGATGTTCTGAAGGGATATCCGCGTTTGCGGTTAACTCATGGGCGGAAGGTTTTAGAGATCCGACCTGTGATTAACTGGGATAAGGGAAAAGCTGTCACGTTTTTACTTGAGTCACTTGGGCTAAACAATTGTGATGATGTGCTTCCTATATATATTGGAGATGATCGGACTGACGAAGATGCATTTAAGGTTTTGAGAGAGGGTAATAAAGGTTATGGGATCTTGGTGTCTTCATCACCAAAGGAAAGCAACGCAATTTACTCTCTTCGTGATCCATCAGAGGTCATGGAATTTCTCAAGTCACTAGTGTTGTGGAAGTCAAGCTGCTTAAAAAGTCTTATATAG 1170 0.4171 MDLKSNHTPVLTDSAPVTNSRLCVHSSLLPYSHSGATFTHGMLLTIPRKKTGILEDVRSSGWLDAMKSSSPPARKITKDVSHGFASSDSDTSGAYFSWLLKYPSALTCFDQITNYAKGKRIALFMDYDGTLSPIVDNPDCAFMSDNMRASVKKVAEYFPTAIISGRSRDKVYQFVGLTELYYAGSHGMDIIGPVRQSESDNHPNCIRSTDKQGKEVNLFQPAAEFLPMINEVLKSLDECTKDIKGAKVENNKFCVSVHYRNVDEKYWDVVGQRVHDVLKGYPRLRLTHGRKVLEIRPVINWDKGKAVTFLLESLGLNNCDDVLPIYIGDDRTDEDAFKVLREGNKGYGILVSSSPKESNAIYSLRDPSEVMEFLKSLVLWKSSCLKSLI 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00097 389 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 29 383 IPR044651 GO:0004805|GO:0005992
Phco9g00097 389 NCBIfam trehalose-phosphatase 118 378 IPR003337 GO:0003824|GO:0005992
Phco9g00097 389 Pfam Trehalose-phosphatase 124 368 IPR003337 GO:0003824|GO:0005992
Phco9g00097 389 FunFam Trehalose 6-phosphate phosphatase 121 211 - -
Phco9g00097 389 CDD HAD_TPP 122 372 - -
Phco9g00097 389 FunFam Trehalose 6-phosphate phosphatase 228 387 - -
Phco9g00097 389 NCBIfam HAD-IIB family hydrolase 123 341 IPR006379 -
Phco9g00097 389 SUPERFAMILY HAD-like 122 380 IPR036412 -
Phco9g00097 389 Gene3D - 121 204 IPR023214 -
Phco9g00097 389 Gene3D - 220 386 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00097 Phco-Chr9 644451 646775 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00097 9 644451 646775 Phco9g00097 9 644451 646775 ECH