Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00096 ATGAACCCTGAATCACAAATTCCCTTGCTGATTCCTCCAAGTTCCCTAACAATGGAAAGTGGGGGGAGGGCACAAAAGGGTGCCCTTCTTTTCATTGTTTCAGTGGTTTTTCTCATGCCATTGGCTGCACTCTTCATAAGCCTGCATATCCATCAACCCTTACTGAGTAATGTTCAGAAGGCTTTCACAAGGGAGGAAAATTCCCTGCCATTGTATCCCAGAGGTGTTGCTGAAGGGGTTTCAGCCAAGTCAAATCCATATCTGTCGCAGAAAGGTTCATATAATTGGACAAATGCCATGCTATCGTGGCAAAGAACAGCTTTCCATTTTCAACCTCAAAAAAACTGGATGAACGGTCCATTGTTTTACAAGGGGTGGTACCATATATTTTACCAATACAATCCTGAGTCAGCTGTGTTTGGCAACATAACGTGGGGCCACGCTGTATCAAGGGACTTGATTCACTGGCTCTACCTTCCCGTTGCGATGCTTCGAGATTCCTGGTATGATGTAAAAGGTGTATGGTCAGGATCAGCCACGCTTTTGCCAGATGGCAAAATCGTAATGCTCTACACTGGTAACACTTATCAGAACGTGCAAGTCCAAAATCTTGCGTACCCCGCCAACCTATCTGATCCCCTCCTCCTTCATTGGGTCAAATACGCGGATAACCCGGTCTTGGTGCCCCCTCCAGGAATTGGGCCGAAGGATTTTCGTGACCCAACCACGGCGTGGATTGGGCCAGATGACAAATGGAGGGTCGCTATTGGGTCAAATGTCAACCAGACAGGTCTTTCGTTGGTGTATAAAACCCAAGATTTCGTTCACTACGAACTCAATGATCAGTATATGCATGGAGTCCCGGGTACGGGTATGTGGGAGTGCGTGGACTTTTACCCGGTTTCAGTAAATGGGCTTGATGGGTTGGATACATCTGTAAATGGGCCGGATGTGAAACATGTGTTGAAGTCTAGTTTGGATGACACTAGGGGGGATCATTACGCGATTGGGACCTACTTCATTGAAAATGATACATGGGTGCCCGATAACCCGAATAAGGATGTGGGTATCGGGTTGAAGTTGGACTATGGGAGATTTTATGCGTCAAAGACATTTTATGACCAATACAAAAAGAGAAGGGTCCTGTGGGGTTGGATCAACGAATCAGACAGCGAAATCGCTGACCTCAAAAAGGGTTGGGCATCTCTTCAGAGTATTCCAAGAACAGTGGTGTTTGACAAGAAGACTAGAACTCATTTGCTTCAGTGGCCAGTGGAAGAAATAGAGAGCTTAAGGCTTAGAAGTTATGAATTTGAAGAAGTTGTGGTTAAGCCTGGCTCAGTTGTACCACTGGACATAGGCCCAGCCACACAGTTGGACATATTTGCTGAATTCGAAATCGAATATTTAGCATCCAAAGGGACCGGGAAGAAGGAAAATGTAGGGTGTGGAAATGGAGCTTTTGACAGAAGTAGTTTGGGTCCATTTGGCATTCTGGCTATTGCAGATGACCAACTTTCTGAGCTAACACCAATTTATTTCCATCTTTCTAACACATCTTCCTTCTGTGTTGATGAAACCAGGTCTTCAAAGGCTCCTGATGTTTCAAAACTCATTTTTGGAAGCGAAGTTCCAGTGGTGGACCATTCAATCATTGAGAGTTTTGCTCAGGGAGGGAGAACTGTGATCTCATCTAGAGTTTATCCAACAGAAGCAATATACGAAGCTGCAAGATTGTTTGTGTTCAACAACGCAACAGACATAAACATCAAGGCCTCACTCAAGATTTGGCAATTGAACTCAGCTTTTATACGTCCCTTTCCCTTTCACCAGAAGTTGTGA 1842 0.4495 MNPESQIPLLIPPSSLTMESGGRAQKGALLFIVSVVFLMPLAALFISLHIHQPLLSNVQKAFTREENSLPLYPRGVAEGVSAKSNPYLSQKGSYNWTNAMLSWQRTAFHFQPQKNWMNGPLFYKGWYHIFYQYNPESAVFGNITWGHAVSRDLIHWLYLPVAMLRDSWYDVKGVWSGSATLLPDGKIVMLYTGNTYQNVQVQNLAYPANLSDPLLLHWVKYADNPVLVPPPGIGPKDFRDPTTAWIGPDDKWRVAIGSNVNQTGLSLVYKTQDFVHYELNDQYMHGVPGTGMWECVDFYPVSVNGLDGLDTSVNGPDVKHVLKSSLDDTRGDHYAIGTYFIENDTWVPDNPNKDVGIGLKLDYGRFYASKTFYDQYKKRRVLWGWINESDSEIADLKKGWASLQSIPRTVVFDKKTRTHLLQWPVEEIESLRLRSYEFEEVVVKPGSVVPLDIGPATQLDIFAEFEIEYLASKGTGKKENVGCGNGAFDRSSLGPFGILAIADDQLSELTPIYFHLSNTSSFCVDETRSSKAPDVSKLIFGSEVPVVDHSIIESFAQGGRTVISSRVYPTEAIYEAARLFVFNNATDINIKASLKIWQLNSAFIRPFPFHQKL 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00096 613 SUPERFAMILY Arabinanase/levansucrase/invertase 102 425 IPR023296 -
Phco9g00096 613 CDD GH32_Fruct1-like 115 410 - -
Phco9g00096 613 SUPERFAMILY Concanavalin A-like lectins/glucanases 424 603 IPR013320 -
Phco9g00096 613 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 113 436 - -
Phco9g00096 613 Pfam Glycosyl hydrolases family 32 N-terminal domain 109 424 IPR013148 -
Phco9g00096 613 Gene3D Glycosyl hydrolase domain; family 43 113 436 IPR023296 -
Phco9g00096 613 Pfam Beta-fructofuranosidase, N-terminal domain 22 101 IPR021792 GO:0004564
Phco9g00096 613 SMART glyco_32 109 559 IPR001362 GO:0004553|GO:0005975
Phco9g00096 613 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 48 602 - -
Phco9g00096 613 Pfam Glycosyl hydrolases family 32 C terminal 427 598 IPR013189 -
Phco9g00096 613 Gene3D - 437 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00096 Phco-Chr9 637283 640247 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00096 9 637283 640247 Phco9g00096 9 637283 640247 ECH