Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00092 ATGTCGAAAGCATCATGGCTAGTAAGAATCACAGTTATGGTGATGATGATGATGATGATAACAGTGAAAAGTGAAGATTCAATAAACTATGAAGAAGCATTAGGAAAGAGCATTTTGTTCTTCGAAGGTCAGAGGTCTGGCAAGTTGCCACCTTCCCAGCGCATGAAATGGCGGAACGATTCAGCACTTTCTGATGGCTCGGATATTCGTATAGACATGGTGGGTGGATACTATGATGCTGGCGACAATGTAAAGTTCAATTTTCCAATGGCATTCACAACGACTATGCTAGCTTGGAGTGTGGTAGAATTTGGAGATCTGATGGGTACAGAGCTAAAAAATGCGTTAGATGCAATCAGGTGGGGAACTGACTATTTCCTTAAAGCCACGAAGTTTCCTAATATTGTTGTGGCACAAGTTGGAAATCCAATTGCCGACCATGACTGTTGGGAGAGACCAGAAGACATGGACACTCCTCGAACCTCGTACTTTGTCACTCCTCAGAAGCCAGGTTCGGAACTCGCTGGTGAGATTGCAGCTGCACTTGCAGCATCTTCCATGGCATTTAGGACAACCGATGCTTCCTATTCCAACATTCTTCTTGATAGAGCTATCCAGGTGTTTGATTTTGCAAACAAATATCGTGGATCTTATAATACCAGCGTAGGTGAGGGAGCATGCCCCTTCTACTGTGATTTTAACGGCTACATGGATGAGTTGATTTGGGGAGCATCATGGTTGTATAAAGCCACAAACACAGCCAATTATTGGGATTTTGTAAAATCAAACATTCAAACATTGGACGCTGGTCTTTTTGATTTTGGATGGGATGGCAAACAGGCTGGCATAAATGTGCTTGTTTCTCAGTGGGCGATGGGTGATTCAGGCAGTGCAGACCTTTTCATTCCTAATGCAGATAAACTTATGTGTTCTTTTCTGCCGAATTCAGCTACCAAATCAGTGTCCTACTCTAAAGGTGGTCTTCTATTCAAACCTGGAGGAAGTAATCTACAACACGCAACAGCTCTGTCATTTCTCTTGATTGTTTATGCACGGTACATGAATGCTGTGAATAAAACAATACCCTGTGGGCAAGAAGTTGTGGATCCGATTAGGTTGATAAATATTGCAAAAAGTCAGGCTGATTACATTCTGGGAAAAAATCCACTGGGAATGTCATACATGGTGGGGTATGGAAGCAAGTTTCCTGAGAAGATACACCATCGTGGTTCAGTGATAGCATCTTTGGATGCACACCCAGCACACATTGGTTGTAGAGATGGAGATGAATACTTCAAATCAGATGAACCCAATCCCAACGTTCTCACAGGAGCTCTTGTTGGAGGACCAGCATACGATGATTCCTTTCAGGATTCCCGTTACAATTGCACCCAATCAGAACCAACCACCTACATCAACGCTCCTTTTGTTGGTGTTTTGGCTTACCTCAACAAACCCACTGTTACTTAG 1470 0.4313 MSKASWLVRITVMVMMMMMITVKSEDSINYEEALGKSILFFEGQRSGKLPPSQRMKWRNDSALSDGSDIRIDMVGGYYDAGDNVKFNFPMAFTTTMLAWSVVEFGDLMGTELKNALDAIRWGTDYFLKATKFPNIVVAQVGNPIADHDCWERPEDMDTPRTSYFVTPQKPGSELAGEIAAALAASSMAFRTTDASYSNILLDRAIQVFDFANKYRGSYNTSVGEGACPFYCDFNGYMDELIWGASWLYKATNTANYWDFVKSNIQTLDAGLFDFGWDGKQAGINVLVSQWAMGDSGSADLFIPNADKLMCSFLPNSATKSVSYSKGGLLFKPGGSNLQHATALSFLLIVYARYMNAVNKTIPCGQEVVDPIRLINIAKSQADYILGKNPLGMSYMVGYGSKFPEKIHHRGSVIASLDAHPAHIGCRDGDEYFKSDEPNPNVLTGALVGGPAYDDSFQDSRYNCTQSEPTTYINAPFVGVLAYLNKPTVT 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00092 489 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 383 409 IPR018221 -
Phco9g00092 489 SUPERFAMILY Six-hairpin glycosidases 29 485 IPR008928 GO:0005975
Phco9g00092 489 Gene3D - 25 488 IPR012341 GO:0005975
Phco9g00092 489 FunFam Endoglucanase 26 488 - -
Phco9g00092 489 Pfam Glycosyl hydrolase family 9 30 480 IPR001701 GO:0004553|GO:0005975
Phco9g00092 489 PANTHER ENDO-1,4-BETA-GLUCANASE 11 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00092 Phco-Chr9 609675 612159 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00092 9 609675 612159 Phco9g00092 9 609675 612159 ECH