Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00089 ATGGCATTGCACGCTCTCTTTAGAACACTTGCATCACTTCTGTTCCTCTCAACCTTTCTCCAACTAGCACAATCCACAACCACCACCGATTCCCTCAAAGCCTACAAAAAGTTCATAAAAGATCAGTGCAATTCCACCGCTTATCCAATAGTTTGCTACAAGTCTCTCTCCCCATATGCATCAAAAATCAAAAGAAACCACATAACACTCACCAGACTCTCCATTAACGTGGCTCTAAAAGAAGCCAAGAGTGCAAAAAGCACGTTGAAAAAGTTGTCCAAGGGGAAGCTATCAGATGGAGAAACGTCGGTGATTGCTGACTGTCGAGAGAACATAGAGGACACGTTGGATCTGCTTCAGCAATCTGTCGATGGGTTGGCACATTTGAACGGAAACTCTACTGCTGATGAGAGGTTTCAATGGGATAACATAAAGACCTGGGTGAGTGGTTCCATAACAGATGAATCTACATGCACCGATGAGTTTGATGAAATACAAGTGCGTTCTTCACTGCAGAACAAGATCAAAACCACCATTTATAATGTTTCTTCCTTGATTAGCATTGCCTTGGCATTCGTCAACACCCTTTTCTAA 594 0.4276 MALHALFRTLASLLFLSTFLQLAQSTTTTDSLKAYKKFIKDQCNSTAYPIVCYKSLSPYASKIKRNHITLTRLSINVALKEAKSAKSTLKKLSKGKLSDGETSVIADCRENIEDTLDLLQQSVDGLAHLNGNSTADERFQWDNIKTWVSGSITDESTCTDEFDEIQVRSSLQNKIKTTIYNVSSLISIALAFVNTLF 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00089 197 SMART PMEI_2 34 192 IPR006501 GO:0004857
Phco9g00089 197 Pfam Plant invertase/pectin methylesterase inhibitor 37 191 IPR006501 GO:0004857
Phco9g00089 197 NCBIfam pectinesterase inhibitor domain 13 196 IPR006501 GO:0004857
Phco9g00089 197 PANTHER PECTINESTERASE INHIBITOR-LIKE 13 192 - -
Phco9g00089 197 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 36 196 IPR035513 -
Phco9g00089 197 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 196 IPR035513 -
Phco9g00089 197 CDD PMEI-like_3 43 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00089 Phco-Chr9 595272 595865 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00089 9 595272 595865 Phco9g00089 9 595272 595865 ECH