Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00071 ATGACTCCAGTTAATTTGGCAGGCCAGTTTGGTGACACCACATACACTAAGGTCTTTGTTGGAGGCTTGGCCTGGGAGACTCAAAAGGAGACCATGAAGAAGTATTTTGAGCAATTTGGTGAGATCTTGGAGGCTGTTGTCATCACTGACAAAGCTACTGGAAGATCTAAAGGCTATGGATTTGTTACATTTCGCGAACCAGAAGCTGCCATGAGAGCTTGTGTAGATGCTGCCCCTGTAATCGACGGTAGGAGAGCTAACTGCAACCTTGCTTCTTTGGGTGTCCAGAGATCTAAGCCTTCAACCCCAAAGCATGGAGGAGGAGGGAGGAACTTGAGAGTAATGGGTTCTTTCCAGACAGGATTTGGAGGGGGAGTGGGATCGGCTTTTCCTTCAGCAGCAACCTTCCCTCATTATGCCATCCAGCAAGGGATACCTTATAATGTTTATGGGTACTCTCCTTACTCGCCGGATTACACTTACCCTACGAGCTACTATGGTGTGTATGGAGGAGCAACAGCTCAGTACCCAGTTTATGGAAGCGGGCCAGGAGGGATGATGACGGGGGCTGCAGCTTTCTACCCATATCTGCAGTACGGAGGAGAAGGGAGTGGCGGCGGTGGCACAAGTGGGGGCTATAGTTCCGGGCAGGGTTACGGCGTGAACTATGCCCCTCACCTCTTTCAGTATTCTCCGATTGCTTCCACTGCAGCAGGTGCCTATGCCCAGCACTATGGAACACCCATGTCTCTTGCTCCTTCCCCTGCCTTGCAATCAGTGTGTTTCGCTGTGCCGCAGGCGTGA 804 0.5137 MTPVNLAGQFGDTTYTKVFVGGLAWETQKETMKKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGGGRNLRVMGSFQTGFGGGVGSAFPSAATFPHYAIQQGIPYNVYGYSPYSPDYTYPTSYYGVYGGATAQYPVYGSGPGGMMTGAAAFYPYLQYGGEGSGGGGTSGGYSSGQGYGVNYAPHLFQYSPIASTAAGAYAQHYGTPMSLAPSPALQSVCFAVPQA 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00071 267 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 18 73 IPR000504 GO:0003723
Phco9g00071 267 SUPERFAMILY RNA-binding domain, RBD 12 111 IPR035979 GO:0003676
Phco9g00071 267 Gene3D - 7 112 IPR012677 -
Phco9g00071 267 SMART rrm1_1 17 89 IPR000504 GO:0003723
Phco9g00071 267 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 16 100 IPR000504 GO:0003723
Phco9g00071 267 PANTHER BOULE-RELATED 6 239 - -
Phco9g00071 267 FunFam RNA-binding (RRM/RBD/RNP motifs) family protein 10 97 - -
Phco9g00071 267 CDD RRM_RBM24_RBM38_like 16 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00071 Phco-Chr9 483649 487010 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00071 9 483649 487010 Phco9g00071 9 483649 487010 ECH