Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00045 ATGCAAATTCCGGAATGGATGAACCATCATTCAACAAACTACTCTTCTTCTCGCGTCGGTTTAGGAGGCGCGGAGGAAGAGGCGGTTGTCGGAGACATGGCTTTCTGGGGAGTGGAAGTGAAACCAGGAAAGCCTTTTACTCATAAATATGAGGACTCCAAAGGACGCCTCCATATTTCAATGGCCACTCTGGGGTTGGGCACTGCCACAACAAAAAGCACACTGCAGTGCAATGTCGGAAACAGGAGCCCTGTATACCTATGCTGTCTCTATCCTGGAAATGCAGAGTCATTGCAGTTAAACTTAGAGCTCGAAGAAGTTGATCAAGTTCTTTTCTCTGTAATTGGCCCTCGGAGCATTCATCTCTGCGGCTACTATCTTACCACTGCCCGCAACACCAATCTTGTTGATGATTCTGAATCATATGGGGAGGATATTGCTGATACAGAAACAGAGAGATCTGATTACAGTGACGAAGATGATTATGAGGATAGTTTTATTGATGATGACATTGTTCCAGAGGCTTTCTCACCATCTCCTATTTCCAAAGAAGAGGAAGCTTCTCATGACACCAGACCAAAAATTAGGAAAGGCAGTCTTCGACGGCTTAGGAAAAGGTACCAGTCAGTTGAGTCGGATGATGATGGCTGTTGTGGAGAAAAGATAATTGGCAATGACAGAATGCATGACCAAATCCAGGAAACTGACAATGAAGATAGCCTACCTATTTCATCTCTTTACAAGAATAAAACCTCCGGAAGGGTCGTGGACCAGGAAATGGATGTTAGTGTTGTCATAGGAGCAGGTGCTGCCAGCAACAAGAATGGGGAAGATGGTGGAAATAGTACTTTTGAAACAAATCTAGAGGCTGGACATGTCCTTGTAGATAGTCTGACACATAGGGAAGCTGTGCCATCAAAGCACTTGGTAGATCCTTGCACATCTCTGGATGTTCGGGATATTAAAAATTCAAAAAAGAAAAAGAAGAGAAAGGAAAAAGAGACAAAAAGCTCCTGTAATGGCCATTCTATCAAACTAGATAATGTTATAGATGAGCTAAAAATGGAAGAGATGACCCAGGATATTGTGGCAGGAGGTAAACAACAGCAGCATGCTGATGATAAGGAAACTGAGACCACAGATAAAATACTGTCTTCCTCTCAGGTTGATCATGGGCTGGGTGAAAAGCCAAAGAAGAAAAGGAAATTAAGATCTAATGAGGGGATGGATTCAATTTCTACTGATGGCTATCATATCAGTCTTGTTAATCTGCCTCTAAGAAATGAACAACACACAGTTAATGAGGATGTTGAAATTTCAGGCAATGTTGCATTGCCTTCTGCTGAGACGGATCCTAAAAAGAACAGGACAAAGGGGAAAAAGAAAGAACAGCTAAACAAAAGTGACAATGGATATAATGAAAATGCCATCCAGGAGGACAAGGCCAACAGAGATGCAGCAGGGTCACAAAATGTGATTTATAATTTTTTTGAAGAAAAACAAAAGCATCAGAAGCTAACTAATGAGAAAATGGTAGACAATGGTGCTTTTGACTTACCTGATGGAAATCAATCTGAGAATAGAAAAGTTAAGAAAAGGAAGAAAATGAGCAAAAGTCAGGGCAACGGGGAAGTTGTAAATTCTAATGTTGCTGTATATGTGGAGCGAAGTGGTGAGACTGAGATGATGGAGGAGGATAGAAATAAGGGGGTAGATGCAAAACCTTCCCATGTTAGAACATTGACAAATGGACTGGTTATTCAGGAACAAGAGAAGGGGATAAAAGATGGCAAAATCGCTGCTTCAGGAAAAAAGATTAGCATCTATTACACTGGCAAGTTGAAGGAAAATGGAACTGTCTTTGAGTCAAATGCCGGCCAAGCTCCTTTCAAATTTCGCCTTGGTAAAGGAGAGGTTATCGAGGGTTGGGATGTTGGCCTTGAAGGCATGCAAGTTGGAGAAAAGAGGAGACTCGTTATCCCACCATCACTGACGTCTGAGAGTGAAGGACACTCTGCCAAAATACCACCAAATTCATGGTTGGTTTATGACATTGAACTAGTTAAAGTTCATTGA 2076 0.4181 MQIPEWMNHHSTNYSSSRVGLGGAEEEAVVGDMAFWGVEVKPGKPFTHKYEDSKGRLHISMATLGLGTATTKSTLQCNVGNRSPVYLCCLYPGNAESLQLNLELEEVDQVLFSVIGPRSIHLCGYYLTTARNTNLVDDSESYGEDIADTETERSDYSDEDDYEDSFIDDDIVPEAFSPSPISKEEEASHDTRPKIRKGSLRRLRKRYQSVESDDDGCCGEKIIGNDRMHDQIQETDNEDSLPISSLYKNKTSGRVVDQEMDVSVVIGAGAASNKNGEDGGNSTFETNLEAGHVLVDSLTHREAVPSKHLVDPCTSLDVRDIKNSKKKKKRKEKETKSSCNGHSIKLDNVIDELKMEEMTQDIVAGGKQQQHADDKETETTDKILSSSQVDHGLGEKPKKKRKLRSNEGMDSISTDGYHISLVNLPLRNEQHTVNEDVEISGNVALPSAETDPKKNRTKGKKKEQLNKSDNGYNENAIQEDKANRDAAGSQNVIYNFFEEKQKHQKLTNEKMVDNGAFDLPDGNQSENRKVKKRKKMSKSQGNGEVVNSNVAVYVERSGETEMMEEDRNKGVDAKPSHVRTLTNGLVIQEQEKGIKDGKIAASGKKISIYYTGKLKENGTVFESNAGQAPFKFRLGKGEVIEGWDVGLEGMQVGEKRRLVIPPSLTSESEGHSAKIPPNSWLVYDIELVKVH 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00045 691 Gene3D Nucleoplasmin core domain 30 131 - -
Phco9g00045 691 MobiDBLite consensus disorder prediction 139 161 - -
Phco9g00045 691 SUPERFAMILY FKBP-like 542 690 - -
Phco9g00045 691 MobiDBLite consensus disorder prediction 513 543 - -
Phco9g00045 691 MobiDBLite consensus disorder prediction 362 414 - -
Phco9g00045 691 MobiDBLite consensus disorder prediction 392 408 - -
Phco9g00045 691 MobiDBLite consensus disorder prediction 437 485 - -
Phco9g00045 691 MobiDBLite consensus disorder prediction 323 343 - -
Phco9g00045 691 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 603 691 IPR001179 GO:0003755
Phco9g00045 691 Pfam Nucleoplasmin-like domain 35 127 IPR041232 -
Phco9g00045 691 MobiDBLite consensus disorder prediction 173 197 - -
Phco9g00045 691 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 599 688 IPR001179 GO:0003755
Phco9g00045 691 Gene3D - 551 691 IPR046357 GO:0003755
Phco9g00045 691 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 73 406 - -
Phco9g00045 691 MobiDBLite consensus disorder prediction 141 161 - -
Phco9g00045 691 MobiDBLite consensus disorder prediction 451 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00045 Phco-Chr9 306668 314198 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00045 9 306668 314198 Phco9g00045 9 306668 314198 ECH