Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g03311 ATGCCAGAGGTTTTCACTGTGAAGGTTGAGGAGGGAAGGCCTGCAACTGATGGAAAGCCATCAGCAGGTCCTGTGTACAGGAGCATTTATGCTAAAGATGGTCTCTTGGAGGTTCCTTCTGATTTGGAGTCCCCTTGGGATTTCTTCAGGGACTCTGTTAAAAGGAACCCCAACAATAAAATGCTTGGTAGGCGTCAAAAAACAGAATCTAAGGTGGGTTCCTATGCATGGCTTACATATCAAGAGGTTTATGATGCTGCCCTGAAAATGGGTTCTGCCATGAGGAGCCGTGGTGTCAATCCAGGAGATCGTTGTGGCATATATGGGTCCAACTGTCCTGAATGGATCATTGCAATGGAGGCTTGCAATAGCTGTGCAGTGTCATATGTTCCCTTATATGACACCCTTGGTCCTAATGCGGTGGAGTTCATCATAAATCATGCTGAAGTTTCAATTGCATTTGTTCAGGAAAAAAAAATTCCATCAGTTTTGTCATGTCTTGTGCAGTGTTCTTCAAATCTTAAAACTATTGTGAGCTTTGGAAGTGTTTCGACCACACAAAAGAAGGAAGCTGAGGAGCATGGTGTGTCCTGCTTTTCATGGGGAGAGTTTCTATTGTTGGGATGTCTGGATTGGGATTTACCATCGAAAAAGAAGACAGACATTTGCACAATAATGTACACAAGTGGAACAACTGGCGATCCCAAAGGTGTTGTTATTAAGAATCAGGCTTTCATGGCTGAAGTGTTGTCTGTTGACCACATACTTAAGTTAACAGACAGGGTGGCAGCAGAAGACGATGTGTACTTCTCCTTTCTTCCTCTTGCTCACGTATATGACCAAATAATGGAGACCTATTGCATCTCCAAGGGCTCATCAATAGGATTTTGGCAAGGAGATGTCAGGTTCTTGCTGGAAGATGTTCAGGCACTACAACCAACTATGTTTTGTGGTGTTCCTAGAGTTTTTGATCGTATTTGTGCTGGTATCAAAAGCAGACTTTCTTCAGCAGGAGCACTGCAGAGTACACTGTTTCAGTGTGCTTACAACTACAAGTTAAAATATCTGGAGAAGGGTCTTCCACAACACAAAGCAGCACCTCTGTTCGATAGGCTTGTGTTTGAGAAGACAAAACAAGCACTGGGTGGACGTGTACGCATCCTGTTATCTGGAGCTGCTCCTTTGCCTAGGCACGTGGAAGAGTTCATGAGGGTCACTAGTGGATCTACATTATCACAAGGATATGGTCTTACTGAAAGTTGTGCTGGGTGTTTCACAGCCATAGGTGATGTGTATTCCATGACAGGAACAGTTGGTGTTCCCATGACAACCATTGAAGCCAGGCTTGAATCTGTGCCAGAGATGGAATATGATGCTCTCTCCAATGTAGCCCGCGGAGAAATTTGTCTGAGAGGAAACACCTTGTTCTCTGGTTATCACAAGCGTGAAGATCTGACCAAAGAGGTTATTGTTGATGGTTGGTTTCACACAGGAGACATTGGAGAGTGGCAACCAAATGGAGCCATGAAAATTATTGATAGGAAGAAGAATATCTTTAAATTATCTCAAGGAGAATATGTTGCTGTGGAGAATATTGAAAACAAGTATTTGCAATGCCCCCTTATAGCATCGATTTGGGTGTATGGAAACAGCTTTGAGTCATTCTTGGTGGCTGTTGTGATCCCTGAAAGAAAGGCCATTGAGGATTGGGCACTAGTGCACAATGTGAGTGATGATTTTAAATCATTATGTGATAATCTAAAAGCAAGAAAGTACATTTTGGATGAGCTCAACAGCACTGGTCAGAAACACCAACTTAGAGGATTTGAGCTGCTAAAAGCCATTCATCTGGAACCAAATCCCTTTGACATGGAGAGAGATTTAGTAACTCCAACTTTCAAATTGAAGAGACCACAATTGCTCAAGTACTACAAGGATCACATTGATCTACTCTACAAAGAAGCAAAGGGAGCAATGCAGTGA 1983 0.4286 MPEVFTVKVEEGRPATDGKPSAGPVYRSIYAKDGLLEVPSDLESPWDFFRDSVKRNPNNKMLGRRQKTESKVGSYAWLTYQEVYDAALKMGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSCAVSYVPLYDTLGPNAVEFIINHAEVSIAFVQEKKIPSVLSCLVQCSSNLKTIVSFGSVSTTQKKEAEEHGVSCFSWGEFLLLGCLDWDLPSKKKTDICTIMYTSGTTGDPKGVVIKNQAFMAEVLSVDHILKLTDRVAAEDDVYFSFLPLAHVYDQIMETYCISKGSSIGFWQGDVRFLLEDVQALQPTMFCGVPRVFDRICAGIKSRLSSAGALQSTLFQCAYNYKLKYLEKGLPQHKAAPLFDRLVFEKTKQALGGRVRILLSGAAPLPRHVEEFMRVTSGSTLSQGYGLTESCAGCFTAIGDVYSMTGTVGVPMTTIEARLESVPEMEYDALSNVARGEICLRGNTLFSGYHKREDLTKEVIVDGWFHTGDIGEWQPNGAMKIIDRKKNIFKLSQGEYVAVENIENKYLQCPLIASIWVYGNSFESFLVAVVIPERKAIEDWALVHNVSDDFKSLCDNLKARKYILDELNSTGQKHQLRGFELLKAIHLEPNPFDMERDLVTPTFKLKRPQLLKYYKDHIDLLYKEAKGAMQ 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g03311 660 Pfam AMP-binding enzyme C-terminal domain 532 600 IPR025110 -
Phco8g03311 660 CDD LC-FACS_euk 73 653 IPR045311 GO:0004467|GO:0006631
Phco8g03311 660 ProSitePatterns Putative AMP-binding domain signature. 225 236 IPR020845 -
Phco8g03311 660 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 20 652 - -
Phco8g03311 660 Pfam AMP-binding enzyme 50 522 IPR000873 -
Phco8g03311 660 SUPERFAMILY Acetyl-CoA synthetase-like 41 652 - -
Phco8g03311 660 Gene3D - 34 514 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g03311 Phco-Chr8 47747756 47754043 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g03311 8 47747756 47754043 Phco8g03311 8 47747756 47754043 ECH