Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g03303 ATGGGTCCTCTAACGCCCACACCCACCATGGACATCATCTATGATCTCATTGAAGAGGCCAAGCTCCGTCTTCTCTGGTGGGCTCTTTGTATATTCGCCATTTCCTATTTCTTCACTCATACAAGTAAATCTATGTGGATGAATCTTCCCATGTCCATTCTGTTTGTTGCTGCTCTGCGCATTCTTTTGAACAAGGTGGAACTCCGTTGGAAGGTTCAGCCACCAAGATTACAGCCTTATCTATCTCACTTGGAGAAAAATCAGCTGCCTCTGAATGATGAACGACTCTCTTCTTCACCCCACCCTCCCAAATGGAAGAAGATCGATTCTCCAGTTGTGGAGGCTGCCTTGAATGATTTCATTGATCTGATATTGAAGGATTTCGTGATAAATATGTGGTATTCTGACATTACTCCAGATATGGAGTTTCCTGAGATGATACGAGACTTAATCATGGACGCTATTGCTGAAGTGTCAGTGAGGGTTAAAGAGATAAACCTTGTTGACTTACTCACGAGGGACATAGTTGATTTAATAGGGGATCATATAGACCTTTTCAGAAGAAATCAAGATGCTATAGGTGTTGATGTCATGTTAACCTTATCTTCTGAGGAGAGGGATGAAAGATTGAAGTTTCATCTGTTGAATTCTAAGGAGCTTCATCCAGCACTAATATCTCCAGAGAGTGAGTACAAGGTTCTCCAGAGGCTAATGAGTGGATTATTAACTACAGTACTGAGAAAACGAGAAGCTCAATGTCCTGTCATTCGATGTATAGCTCGGGAACTTTTAACTTGTTTGATATTGCAACCTGTCATGAATTTGGCAAGCCCAGGGTACATCAATGAGCTAATTGAATCCCTTCTGCTTCTCCTTAATGAGGATGGTATAAGTTGGTTGGGGGTCTGTGAACATTCAACCAATACAACTCATAATCATGGCCATTCTGGTGCTGGGGGTGGACATGATAACCATACAGCCTCTGCTGATTGGGCACAAATGCTAGAGGCTGCAACCCAGAGAAGAACTGAAGTTCTTACACCTGAGAATCTGGAGAACATGTGGGCAAGAGGAAGGAATTATAGACGGAAACAACATAAAAGTACCAAAACCGGGTCTCAGGACCCTTCTATGAAATGTCCTGCTACTGATGCAACTCCAGAAGGAACGAGTCCTCTGCATTATGTGGGTTCAGATCCACTCCTAAATGTTGTAGGCACAAATAGGTCGGAGTCTTCACCAGATGCAGATGCTGACAAGGAACTCTGTTCTGAAGTAGACCATCATGTTGATGAAGTTAAGGATACCAAGGACTTCACTTCTGAAAAATATAAAGATCTAAAGAGATCCAACAGTGCTTCTCTCCTGGGAAGCCAACATCCTCTTAAGGTATGCTCCCCGAGGTCAGAGTTCCACAACCCTGAATCTGAGAAACATGGTGAGGGATATCGCGGAAAGAGTGGTTCTGACATGGTTGTTAGAAGAGAGGGACATCTTGTTCCGAAGCTTCGGTGTCGGGTGATGGGAGCATATTTTGAGAAACTAGGATCCACTTCTTTTGCTGTATATTCAATTGCAGTGACTGATGGTCTAGAGAAAACTTGGTTTGTTAGAAGAAGATACAGGAATTTTGAGCGATTGCATCGACATCTAAAAGATATTCCTAATTACTTGCTACATTTGCCTCCCAAAAGGATATTTTCCTCAAGCACAGAGGATGCCTTTGTCTATCAGCGATGCATTCAGTTTGATAAATATCTCCAGGATCTCCTATCAATAGCTAATATTGCTGAACAACATGAAGTGTGGGACTTTTTAAGTGTTTCCTCAAAGAACTACTCTTTTGGGAAATCTTCTTCAATGATGAGGACCCTGGCAGTCAATGTAGATGATGCTGTGGATGATATTGTACGACAATTTAAAGGTGTTTCAGATGGTTTAATTCGAAAAGTTGTTGGTTCATCATCCCCTACTACGTCAACCAATCATAACATGTCCTGGAACATGGATGAGGTGGATAAAAGTGTTCCAAGGCAAACTACTGCAGAGTGTGTGCTAAGCTCTGATAATGAGGACGGTGAAAAGGAAGCTAATTTTGGTCATGAGAATATTGATAAAGAAGCACAAGATAATGGGTGGAATTCTGACAATGAATTGAGCTCAAAGGAAGATTCACAACTGCTAATAAACCATGATAATGAATCTACTAACTTGGATATAGATAGAAAACATGATGTACCAATGGAAGCTAAGGTTGGAAAGGATGTTCCAGCTACAAATTTCAATCCAGTTCCCGATAATATGGAGGATCCAGTTGGAGTTCCACCTGAGTGGACCCCACCTAACGTGACTGTCCCTATTTTGAATTTGGTTGACAATGTATTTCAGCTTAAGAAAAGAGGTTGGCTAAGAAGACAGGTCTTTTGGATTTCAAAACAGATATTACAGGTGGTGATGGAAGATGCTATTGATGATTGGATCCTAAGGGAGATTCATTGGCTTCGCAGAGAGGACACCATTGCCCAAGGGATTCGGTGGGTCCAAGATATCCTCTGGCCTGGTGGTACATTTTTTTTAAGAGTACAGACCCCTCAGCTGTTAATTGGTGGCAGTGCATATTATCAAAAGCCTTTACCAAGCATAAGTGAATCTGGCGGAAGCAGGATGTCCAAATCACAGTCAGGATCTTTCGAGCTACAGCTTGAGGCTATTCGTAGAGCAAATGATTTGAAGAAATTTCTCTTTGATGGAGCTCCAACAGCTTTAGTTGGCTTAATTGGTCAGAAGCAGTACAAACGTTGTGCCAGTGATATATATTACTTTACTCAGTCTTCCATATGTGTGAAGCAACTTGCTTATGCAATACTTGAACTTCTACTTATATCCATCTTTCCTGAGTTGAGGAATGTTGTCATTAGTGTTCATGAGAATATGCACGTTCACCAACCTGTATAG 2955 0.4162 MGPLTPTPTMDIIYDLIEEAKLRLLWWALCIFAISYFFTHTSKSMWMNLPMSILFVAALRILLNKVELRWKVQPPRLQPYLSHLEKNQLPLNDERLSSSPHPPKWKKIDSPVVEAALNDFIDLILKDFVINMWYSDITPDMEFPEMIRDLIMDAIAEVSVRVKEINLVDLLTRDIVDLIGDHIDLFRRNQDAIGVDVMLTLSSEERDERLKFHLLNSKELHPALISPESEYKVLQRLMSGLLTTVLRKREAQCPVIRCIARELLTCLILQPVMNLASPGYINELIESLLLLLNEDGISWLGVCEHSTNTTHNHGHSGAGGGHDNHTASADWAQMLEAATQRRTEVLTPENLENMWARGRNYRRKQHKSTKTGSQDPSMKCPATDATPEGTSPLHYVGSDPLLNVVGTNRSESSPDADADKELCSEVDHHVDEVKDTKDFTSEKYKDLKRSNSASLLGSQHPLKVCSPRSEFHNPESEKHGEGYRGKSGSDMVVRREGHLVPKLRCRVMGAYFEKLGSTSFAVYSIAVTDGLEKTWFVRRRYRNFERLHRHLKDIPNYLLHLPPKRIFSSSTEDAFVYQRCIQFDKYLQDLLSIANIAEQHEVWDFLSVSSKNYSFGKSSSMMRTLAVNVDDAVDDIVRQFKGVSDGLIRKVVGSSSPTTSTNHNMSWNMDEVDKSVPRQTTAECVLSSDNEDGEKEANFGHENIDKEAQDNGWNSDNELSSKEDSQLLINHDNESTNLDIDRKHDVPMEAKVGKDVPATNFNPVPDNMEDPVGVPPEWTPPNVTVPILNLVDNVFQLKKRGWLRRQVFWISKQILQVVMEDAIDDWILREIHWLRREDTIAQGIRWVQDILWPGGTFFLRVQTPQLLIGGSAYYQKPLPSISESGGSRMSKSQSGSFELQLEAIRRANDLKKFLFDGAPTALVGLIGQKQYKRCASDIYYFTQSSICVKQLAYAILELLLISIFPELRNVVISVHENMHVHQPV 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g03303 984 Pfam PXA domain 110 288 IPR003114 -
Phco8g03303 984 MobiDBLite consensus disorder prediction 470 488 - -
Phco8g03303 984 Pfam PX domain 532 608 IPR001683 GO:0035091
Phco8g03303 984 ProSiteProfiles PXA domain profile. 110 293 IPR003114 -
Phco8g03303 984 Pfam Sorting nexin C terminal 802 945 IPR013937 -
Phco8g03303 984 Gene3D - 504 618 IPR036871 GO:0035091
Phco8g03303 984 SMART PXA_3 110 293 IPR003114 -
Phco8g03303 984 MobiDBLite consensus disorder prediction 688 722 - -
Phco8g03303 984 MobiDBLite consensus disorder prediction 463 488 - -
Phco8g03303 984 MobiDBLite consensus disorder prediction 688 712 - -
Phco8g03303 984 ProSiteProfiles PX domain profile. 501 613 IPR001683 GO:0035091
Phco8g03303 984 SUPERFAMILY PX domain 503 610 IPR036871 GO:0035091
Phco8g03303 984 MobiDBLite consensus disorder prediction 361 389 - -
Phco8g03303 984 SMART PX_2 499 609 IPR001683 GO:0035091
Phco8g03303 984 PANTHER PX SERINE/THREONINE KINASE PXK 106 980 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g03303 Phco-Chr8 47673005 47692787 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g03303 8 47673005 47692787 Phco8g03303 8 47673005 47692787 ECH