Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02936 ATGAACCACAAGCCGTGGCTTTGGAGGAAAAAATCTATGGAGAAAACAATCTTAGCAGGGGACAAAGTTGTCAGTCCTTCTAGACCCATTGAAGAAGAGGTATACAAACTTCCATTAACTAAAGAATCTGGATCGGAAAGATCATCAAAAAGTCTGAATGAGAAGTTGGCAACAGTCCTTCTTGATTCACATTCTGGAGATGACCCTTTAACAAAACATGACCAAAAGTCTCAACAGGAAATTAAAGGCAAGGACAAGAAAAAACAGGAAGTAAAACCTGTTGAAGACTTCAATGAAAAAGCGTCTTCTGTGACTGTTTCTCCTGCAGATGCAACATTAAAGGAACATTTGCAGCCACCAAGCTGTGTTCAAGAAGAACAAGAGAAAAAGTTGAGTGGCGCCATTCCAAAGATATCAATAAAGGATGAGAAGATTCAGAAAGAATTGGAAGAGAAGTTGAGGAAAACAAGTAAAATGATAGATGACCTAACTGCCGAGAATACTCATCTTGCTAATGCCTTGCTAACCAAGGAAAAATCAATTGGGGACCTAGTAAAATGTAAGCAAGAAGCAGATGCTGAGTTTAGTACATTGATGGCTAGGTTAGACACCACAGAAAAGGAAAATTCTTTCCTAAGATATGAGTTTCACGTGCTGGAGAAGGAACTTGAGATCCAGAAAGAGGAGACAGACTATAGCCGTCAGTACGCAGATGCCTCTCATAAACAGTACCTTGAGTGCTCTCAGAAAGTGTCATATTTAGAAGCTGAGTCTCAAAAACTCCGTCTTATGCTACAAAAAAGATCACCTGGTTCTGCTGGTGTGGTGAATATGAAGAATGAAGTTGGAATGATGAGAAGAAGAAAGTCAAATTCCAACAGGGAATTGATCTACAAAAACAATGATGTTGGAAACTCTACTACTGATGTATCTGAGAAAAGTTTCTCCTTAATGATCAGACGCTTGCAAGATCTGGATGAGGAGAACAAGGCTCTCAAAAGAATTTTAACCAAGAAAAACTCTGAACTAGAATCTTCAAGACTTATGTATGCTGAAACAGCTTCCAGATTATCACAGGCTGAGATTCTACTTAGAAAGGTTTCTGAAAATCAGAAGTGTGTGGAGCTATCTCGGTGTTATCCCACATCAAATGAACTTCCTTTGATGTCAAATTGTGACATTTATAGTGATGATGAGGCTATCTCTTCTGGATCCTGGGCGAATGCTCTTATTTCAGAACTTGAACATTTAAGAACTTCAGAGGCCAAAGTTCGTAAGAGCAGTAAAGCCACTGAAGTTTCAGACATGAGTTTCATGGATGATTTTGTTGAGATGGAAAAACGAGCTATAGTTTCTATTGATACACCTAAAAGAGTATGCTTCTCTGATACAAGTGGTAGGGAGCTAGTTCCAGTTGAACAAGATCTTCTTGGCTTCAGTGAGAGGAAAAAGGAGATCCAATTCAAACATACAACTGAAAAATCATTTGACTGGCTTCAGATTGTTTTGAATGCAATCTTAGAGGAGAAAATCGTATCAAAACGAGGTCTTCATGAACTGTTTGATGACATAAAAATTGCTTTGGATTGCATGAATCATCCAACTGCTTGTAAACCTGATACAGAAGCAGAAAACAAGCAACGCCTCAATTCTAATTTGAGAAAGTCAATCCACAGGATTATCAACCTCATTGAAGGTATTGCTCCCAAGTCATTTATGTGCAACAATTGTCCAGATTGCTTGGGGGAGAATAAGCATTCGGACATATCCCAGTCACCAACACCCAAAGACTATTTTGTTCATGTTTTCCAATGGAAGGTAACAGACTTGAATCCTCTCCTGCACCAATTTGTTCACACCTGCAAAGATTTGTTGACAGGGAGAGCTGATTTTGAAAATTTTATTGAGGAAGTAGCATTCGCTTTGGACTGGAGCGTTAATAACTGTGCCACCTCCACAAATGCTGCAATTGCAAGGGATAAGATCAAGAAGCATTTTAGCAGTCATTTATCACAAAATGAAAATAAAATAGATGACGAAGATAAACAGTCTTCTCAATCAGCCTCATATGTATATCTAGAAGATCAGTGTGAGCTCTTGAACACAAAGAATAGTCAGTGTGATCTCCTTGAAGATATTAGAAAGTTAAAAGATGATTTGAGGAATGCAAAAACTGCGAAGAAAGACTTGGAACAAAAGCTGATGTCAGTAACTGATGAGAGTCAGAACTTGACAAAACAGTGTCAAGGAGCACAGAATAACATCAGAGGTTTAGAATCAGAAATAGAGACACTGAAAGATCAGATTGAGAAACAAAAGATCGTAAATGAAGATCTTGATACACAGCTTACAATGGCCCAGGCCAAGTTAAATGACATTTTTCAAAAGTTTTCGTCTTTAGAAGTTGAATTAGAGGATAAAAATAACTCCTGTGAGGAATTAGAAGCGACATGTCTAGAACTTCAACTCCAATTGGAGAGCATTGCAAAGAAGGAATCTCCAACATATGGCAGATACGAAGTAGAAAAGATATACCAAACTGGCTGGGAGATCACAACAGCTTCATCAAAGTTGGCAGAGTGTCAAGAAAGCATCTTAAACCTCGGGAAACAACTCAAAGCACTTGCTTCATCTAGTGAAGTGGCAATTTTTGACAAGGTTGTCTCCACAGCTAGTACTGTGGCCAATCCAACCCAGAAGAAGAACTTGATCAAAAGATCCTCTCTACGAAATCAAATGCAAGCTGAGGATGAAGCCAAAGGAATAATCTATAACTCTGTCCAAACTGAAGAAAGCAGGAGAGAAGAAGATGCGCAGATGCCACCCCTTGTTCAATCTGAAACTGAAAACTCCCTGCAAAGTCCTAATAACTTGGTTAATTCTCCAGAAACAAGTCTCACTTCAGAAAAAAAGGATAGAAGCAAAGGCACAGGATCAATGGCAATGGTGGCCGGTAAGAAACAAGTAGGCTTCGGTTTTCTGAGAAAGCTGCTGTCAAGACGAAAGAAAGGGAGGGCTAAGGGAGCAAGTTATTAG 3036 0.3903 MNHKPWLWRKKSMEKTILAGDKVVSPSRPIEEEVYKLPLTKESGSERSSKSLNEKLATVLLDSHSGDDPLTKHDQKSQQEIKGKDKKKQEVKPVEDFNEKASSVTVSPADATLKEHLQPPSCVQEEQEKKLSGAIPKISIKDEKIQKELEEKLRKTSKMIDDLTAENTHLANALLTKEKSIGDLVKCKQEADAEFSTLMARLDTTEKENSFLRYEFHVLEKELEIQKEETDYSRQYADASHKQYLECSQKVSYLEAESQKLRLMLQKRSPGSAGVVNMKNEVGMMRRRKSNSNRELIYKNNDVGNSTTDVSEKSFSLMIRRLQDLDEENKALKRILTKKNSELESSRLMYAETASRLSQAEILLRKVSENQKCVELSRCYPTSNELPLMSNCDIYSDDEAISSGSWANALISELEHLRTSEAKVRKSSKATEVSDMSFMDDFVEMEKRAIVSIDTPKRVCFSDTSGRELVPVEQDLLGFSERKKEIQFKHTTEKSFDWLQIVLNAILEEKIVSKRGLHELFDDIKIALDCMNHPTACKPDTEAENKQRLNSNLRKSIHRIINLIEGIAPKSFMCNNCPDCLGENKHSDISQSPTPKDYFVHVFQWKVTDLNPLLHQFVHTCKDLLTGRADFENFIEEVAFALDWSVNNCATSTNAAIARDKIKKHFSSHLSQNENKIDDEDKQSSQSASYVYLEDQCELLNTKNSQCDLLEDIRKLKDDLRNAKTAKKDLEQKLMSVTDESQNLTKQCQGAQNNIRGLESEIETLKDQIEKQKIVNEDLDTQLTMAQAKLNDIFQKFSSLEVELEDKNNSCEELEATCLELQLQLESIAKKESPTYGRYEVEKIYQTGWEITTASSKLAECQESILNLGKQLKALASSSEVAIFDKVVSTASTVANPTQKKNLIKRSSLRNQMQAEDEAKGIIYNSVQTEESRREEDAQMPPLVQSETENSLQSPNNLVNSPETSLTSEKKDRSKGTGSMAMVAGKKQVGFGFLRKLLSRRKKGRAKGASY 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02936 1011 Coils Coil 322 342 - -
Phco8g02936 1011 MobiDBLite consensus disorder prediction 943 965 - -
Phco8g02936 1011 Coils Coil 713 782 - -
Phco8g02936 1011 MobiDBLite consensus disorder prediction 37 105 - -
Phco8g02936 1011 MobiDBLite consensus disorder prediction 66 97 - -
Phco8g02936 1011 Gene3D - 664 840 - -
Phco8g02936 1011 MobiDBLite consensus disorder prediction 42 58 - -
Phco8g02936 1011 Pfam Filament-like plant protein, long coiled-coil 104 538 IPR008587 -
Phco8g02936 1011 Pfam Filament-like plant protein, long coiled-coil 542 880 IPR008587 -
Phco8g02936 1011 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 998 - -
Phco8g02936 1011 SUPERFAMILY Tropomyosin 660 829 - -
Phco8g02936 1011 Coils Coil 1011 1011 - -
Phco8g02936 1011 Coils Coil 188 208 - -
Phco8g02936 1011 MobiDBLite consensus disorder prediction 920 983 - -
Phco8g02936 1011 Coils Coil 146 166 - -
Phco8g02936 1011 Coils Coil 797 831 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02936 Phco-Chr8 43182160 43185956 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g02936 8 43182160 43185956 Phco8g02936 8 43182160 43185956 ECH