LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phco8g02871	ATGGAGGAGCAGGGACAACAACAACAGGTTCCTCTCTCCATTGACTGGAACCGACAACTTCAAAATGACTCGCCGCCGCGGGAGGTCGTCATCGTGTCTTCCTCCGCCATGGCCTCTGATCAGGACGACCTCAATGCTATTGCCGATCACAAGCTCAAGGAGTCGATTGAGAGCAAGAAGAGAACACTCGACGCTACCGGCAAGAATTTGCCCGACAATGGCGCCAAGCTTCGCGCTACCATTGACCGCTACCAACAGGAACTTAGTCGCCGGGAATTCATGCGGCTTCGCCAGGAAGTTGATGAGGACAAGAAGGCTCAGCCCGAACAAACTACAAGCTCAAGTGCTGTTACCAAGGGTGTGTCTAATGGTTTGAGAGAAGAGGCTCTGTCATCTCATGCTCAGCCACTATCTACTTTTACATCTTACTTTGTTAAAAAAATGGAAGATAGTACTAGTTGTACAACTGGCGGTGCATTTAAAAATGAGATGTCACATTTCAAACATGTTGAGAACCAGAAAATACTAGAAAATGCAGCTTCTGATGCATTTGAAAAAGAGAGGTCACATTTCAAACATTGTGACAACCAGAAAATACCAGACAATGGAGCCCCTAGAAGAAGAAAGAGACATCGTTCATCATCTAGACAATTGCCCTTTCGGTGTCCTAGTAAACTTTCTAAACATGATACTTTCAGTGATGGTAAAACTTGTAGAGCAACTTCCACTTTTTCTCTGCGGAATATTGGGAGAAATTTGTCAAGATGCTACCCAAAAGAGAAGGTTGCTTCTCAGGCAATTCAATTAGATGGCTCAAGGTCCAGAAAGGGTCAGCCCATTGTTCTTGATATTGACGACGACGACGATGAGGCTCATATTGTGGAGAAAACCGAAAACCAATTTGCTGAATACCTGAAAGAAGCTAAGATCTATTTTCCATCAAGAGATGATCCAGAGTGTGTAGAAATTTGTTACAAAGACACAGATTGCCTTGCCCCTGAAGGCTATTTAACATCAACAATAATGAACTTTTACATTCAATATTTGCAGCGGCAAGTATTGTTGACAACCGACTACCATTTTTTCAATACTTATTTCTACAAGAAGCTTAAAGAAGCTGTTTCGTACAAGCAAAGTGATAGAGATGTGATCTTTGCAAAGTTCAGAAGATGGTGGAAGGGTGTAAATATTTTTCAGAAGGCATATGTTTTGATTCCAATACACGAGGACCTTCACTGGAGTTTGATCATTATTTGTATCCCAGACAAAGAAGATGAATCGGGGCCAATCATACTTCATTTGGATTCTTTGGGTCTTCACTCTAGTAAATCAGTTTTTGATAATATTAAAAGCTATTTGATTGAAGAAAAGAACTACATGGATCGAGAAGATGTGTCTTCAAATGTTTCAATTGCGGACAAAATATGGAAGTGCCTTCCTCGTAGAATTGAATGTCATATCATTACGGTTCCCCAACAGAAGAATGAGTATGACTGTGGTCTTTTTGTGTTGTACTTCATTGAGCGTTTCATGGAGGAGGCACCTGAGAGACTGAAAAAGGAAGATTTGGCAATGTTTGGAAAGCGATGGTTCAAACCAGAAGAGGCATCCAATTTGAGATTGAAAATCCGTAAATTGCTTGTAGAAAAATTACAGAATTCAATGAGGGATAATTGTGACTTAGAATCTTCTCCTTCATCATCTGCTTGCCATGCAACTGATTGTGTTGAGTCCGCCAAGGATTCTATGGCGTAA	1755	0.4125	MEEQGQQQQVPLSIDWNRQLQNDSPPREVVIVSSSAMASDQDDLNAIADHKLKESIESKKRTLDATGKNLPDNGAKLRATIDRYQQELSRREFMRLRQEVDEDKKAQPEQTTSSSAVTKGVSNGLREEALSSHAQPLSTFTSYFVKKMEDSTSCTTGGAFKNEMSHFKHVENQKILENAASDAFEKERSHFKHCDNQKIPDNGAPRRRKRHRSSSRQLPFRCPSKLSKHDTFSDGKTCRATSTFSLRNIGRNLSRCYPKEKVASQAIQLDGSRSRKGQPIVLDIDDDDDEAHIVEKTENQFAEYLKEAKIYFPSRDDPECVEICYKDTDCLAPEGYLTSTIMNFYIQYLQRQVLLTTDYHFFNTYFYKKLKEAVSYKQSDRDVIFAKFRRWWKGVNIFQKAYVLIPIHEDLHWSLIIICIPDKEDESGPIILHLDSLGLHSSKSVFDNIKSYLIEEKNYMDREDVSSNVSIADKIWKCLPRRIECHIITVPQQKNEYDCGLFVLYFIERFMEEAPERLKKEDLAMFGKRWFKPEEASNLRLKIRKLLVEKLQNSMRDNCDLESSPSSSACHATDCVESAKDSMA	584

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phco8g02871	584	Gene3D	-	359	487	-	-
	Phco8g02871	584	MobiDBLite	consensus disorder prediction	99	120	-	-
	Phco8g02871	584	ProSiteProfiles	Ubiquitin-like protease family profile.	321	510	IPR003653	GO:0006508\|GO:0008234
	Phco8g02871	584	MobiDBLite	consensus disorder prediction	188	236	-	-
	Phco8g02871	584	MobiDBLite	consensus disorder prediction	55	74	-	-
	Phco8g02871	584	MobiDBLite	consensus disorder prediction	188	203	-	-
	Phco8g02871	584	MobiDBLite	consensus disorder prediction	1	23	-	-
	Phco8g02871	584	Gene3D	-	312	548	-	-
	Phco8g02871	584	SUPERFAMILY	Cysteine proteinases	311	549	IPR038765	-
	Phco8g02871	584	PANTHER	UBIQUITIN-LIKE PROTEASE 4-RELATED	21	570	-	-
	Phco8g02871	584	Pfam	Ulp1 protease family, C-terminal catalytic domain	336	536	IPR003653	GO:0006508\|GO:0008234

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phco8g02871	Phco-Chr8	42227233	42243234	Dispersed

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Phco8g02871	8	42227233	42243234	Phco8g02871	8	42227233	42243234	ECH