Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02823 ATGGACCATCTTAGACTTATTCTCCTACTCTTCCTCTTCCTACCCACCTGCTTCACTTTCACGTTTCAAATTCCTTCAATCAATGAGTTTTCCAATCAAAGTTCGTCTTCTCTGAAGCAGCAGATTAGCGAGCTAGCTAACAGTCCTAGCACGGTGAAATGGATGAAGAGAATAAGGAGGGAAATCCATGAACACCCAGAACTTGCAAATGAGGAGTTCAGGACAAGTGCTCTCATCAGGCGTGAGCTTGACCAGTTGGGTGTTGCTTACAAGTGGCCTGTGGCTGGGACTGGTGTGGTTGCAAAACTTGGTTCTGGGTCTCCTCCTTTTGTTGCTCTTAGAGCAGACATGGATGCTTTGCCAATTCAGGAAAGGGTTGATTGGGATCATAAGAGCAAAGTGGATGGAAAAATGCATGCTTGTGCACACGATGCACATGTTGCCATGCTACTTGGAGCTGCAAAGATACTGCAAGAAATGAAAGACGTGTTACAGACTACTGTTGTTCTAATCTTCCAACCAGCTGAGGAAAGAGGCACAGGGGCAAAAGAAATGGTCCAAGAAAAGGTGCTTGAAGATGTTGGGGCTATTCTTGGTTTGCACTTGGGGTCAGAGTATCAAACGGGTGTTGTTGCATCACGGCCAGGAGAATTTTTAGCTGGATGTGGAGGCTTTAAAGCAAAGATCAGTGGAAAAGGGGGTTTAGCAGGAGTTCCCCAGCATTGTTATGATCCAGTTTTGGCAGCTTCAACATCAGTTATTAGCTTGCAAAACATTGTTTCAAGGGAGGTTGATCCTTTGGATTCTCAGGTGCTTTCTGTGGCCATGATCAATGCAGGGTATGCTCACGACATCATCCCTGATTCAGCTACATTTGGAGGTACTTATAGAGCATTCAGCAAAAAGAGCTTCTATGGACTGAGGAAAAGGATAGAAGAGGTTATCAAAGGGCAGGCAGAAGTACATAGGTGTTTTGCTGAGGTTGAGTTCTTAGGTAATGAACATCCCACAATCCCTCCAACCACAAATGATGTAAGAATATACCAACTAGCACACCAAGTCTCTAGTAAGATTGTTGGAGAAGATAAGGTAAAATTAGCTCCCCTCTTCACTGGGAGTGAAGATTTTGCATTTTACTTGGAAAAAGTACCTGGCACATTCGTTCTTCTGGGTACACGAAATGAGAAGAGTGGATCCATATATCCTGCTCATAGTCCTTACTTTTTCATTGACGAAGATGTGCTTCCCATTGGTGCTGCAATACATGCAGCATTTGCTCTTTCATACCATTCTTATTCAACAAACTCATACTCTTTGTAA 1320 0.4364 MDHLRLILLLFLFLPTCFTFTFQIPSINEFSNQSSSSLKQQISELANSPSTVKWMKRIRREIHEHPELANEEFRTSALIRRELDQLGVAYKWPVAGTGVVAKLGSGSPPFVALRADMDALPIQERVDWDHKSKVDGKMHACAHDAHVAMLLGAAKILQEMKDVLQTTVVLIFQPAEERGTGAKEMVQEKVLEDVGAILGLHLGSEYQTGVVASRPGEFLAGCGGFKAKISGKGGLAGVPQHCYDPVLAASTSVISLQNIVSREVDPLDSQVLSVAMINAGYAHDIIPDSATFGGTYRAFSKKSFYGLRKRIEEVIKGQAEVHRCFAEVEFLGNEHPTIPPTTNDVRIYQLAHQVSSKIVGEDKVKLAPLFTGSEDFAFYLEKVPGTFVLLGTRNEKSGSIYPAHSPYFFIDEDVLPIGAAIHAAFALSYHSYSTNSYSL 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02823 439 PIRSF Amidohydrol_AmhX 39 432 IPR017439 GO:0016787
Phco8g02823 439 Pfam Peptidase dimerisation domain 221 319 IPR011650 -
Phco8g02823 439 Gene3D Zn peptidases 56 423 - -
Phco8g02823 439 PANTHER PEPTIDASE M20 FAMILY MEMBER 34 436 IPR017439 GO:0016787
Phco8g02823 439 SUPERFAMILY Zn-dependent exopeptidases 51 429 - -
Phco8g02823 439 CDD M20_IAA_Hyd 55 429 IPR044757 GO:0009850|GO:0016787
Phco8g02823 439 Gene3D - 220 339 - -
Phco8g02823 439 FunFam N-acetyldiaminopimelate deacetylase 220 338 - -
Phco8g02823 439 Pfam Peptidase family M20/M25/M40 112 426 IPR002933 GO:0016787
Phco8g02823 439 SUPERFAMILY Bacterial exopeptidase dimerisation domain 220 339 IPR036264 -
Phco8g02823 439 NCBIfam amidohydrolase 56 418 IPR017439 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02823 Phco-Chr8 41570817 41573645 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g02823 8 41570817 41573645 Phco8g02823 8 41570817 41573645 ECH