Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02750 ATGGACCCTACTATTTTTTTATGCAAATTCTTCCAAAACCTCAGTAACTTCCCTGGGGTCCTTCAAAGTATTGAGGTCGTCCACGCTTATTCTTTTGTGTTCTCTTCTCATTCTGTGATTGTCCTTTTGCTAAGTTACAACCTACTGCTAACTAAGATGGCAGCATCTGCAGATAGCACCCACGATGTTGTGTCCCTCCTCTCTTCACCCCAAAGGGACTTTCTTCTGAGGAACAACGGCGATCAGGTGAAAATTGAGAGCTTGAAGGGAAAGAAACTTGGTGTTTACTTTTCGGCATCCTGGTGTGGTCCGTGTCGAAAATTCACGCCAACTTTGGTGGAGGCATACAATGAGATTGTGTCAAAAGGTGACTTTGAGGTCGTTTTTGCCTCGGCTGATGAAAATGAAGAGTCTTTTAAAGGTTACTTTTCCAAGATGCCATGGCTTGCAATCCCATTTTCTGATTCGGAGACACGCAGTCGCCTTGATGAATTGTTTCATGTGAGGGGGATTCCCCATCTCGTGTTGCTTGAGGAAACTGGCAAAGTTGTGACTGAAGATGGAGTTGATATTGTACGTGACTATGGTGTTGAAGCATACCCTTTTACGTCAACAAGGATCCAAGAGTTGAGAGCTCGGGAAGAGGAAGCTAGGAGGAACCAGTCCGTGAGATCTCTCTTGATCTCTCCATCTCGTGACTTTGTTATATCATCCGATGGAAACGAAATACTTGTCTCTGAGCTTGAGGGCAAGACAGTTGGTCTGTATTTCTCTCTGAATTCATTCCAACGAAGCAGTGAGTTTACTCCAAAGCTTGTGGAGGTTTATGAGAAGCTGAAGGCCAAGGGGGAGAACTTTGAGGTTTTGTTAATACCCTTAGATGAAGATGAAGAATCATTCAAGAAAGTATTAGGAAGTGTCCCTTGGTTATCCTTGCCTTTCAAGGACAAAATCTGCGGGAAGCTGGTTCAGTACTTTGAGCTTTCAACCCTCCCCACTTTGGTTATCATTGGGCCTGATGGGAAAACTCTTAATCCTAATGTTGCTGAGGCTATTGAAGATCATGGGGTTGATGCATACCCATTCACTCCTGAAAAGTTTGCGGAGCTTGATGAAATTTTGAAGGCCAGGGAGGCATCTCAAACCCTTGAGTCAGTTTTGGTGTCTGAGGATCATGATTTTCTCATTGGCAAAGATGGGGTGCAGATTCCTGTGTCAGAATTAAAGGGGAAGGTCGTCCTGCTATACTTCTCAGCCCACTGGTGTCCTCCATGCCGCGCATTCCTTCCAAAACTTATTGATGCATATCACGAGATTAAGGCAAAGGGCAATGCATTAGAAGTTGTTTTCATCTCAAGTGACAAAGATCAAGCCTCCTTTGATGAATTCTTTGGAGGAATGCCATGGTTGGCACTTCCCTTTGGCGACTCTAGGAAGAAATTCTTGAGTCGCAAGTTCAAGGTAACTGGCATCCCCAAGCTCGTGGCCATTGGATCAAGTGGCCAGACGTCGACAACTGAGGCTCGAGATCTGGTTTTGCAATATGGGGCTCGTGCATACCCTTTCACTGAAGAGAAAATACAGGACATAGAGGCTGAAGAAGAAGAGACTGCAAAGGGGTGGCCAGAGAAGGTGACACATGACACACATGAGCATGAGCTTGTGCTGACACGCCGCAGGGTGTATTACTGTGATGGTTGCAATGAACAGGGTTACGCATGGTCGTATTACTGTGGAGAGTGTGACTTTGATCTGCATCCAAAATGTGTATTGGAGGAGGACAAAGGAAGCAAAGATGATACTGATGTTAAGGAAGAAGACAAGTCCAAAGATGGATGGGTATGTGATGGAGAAGTCTGCAAAAAAGTCTGA 1872 0.4503 MDPTIFLCKFFQNLSNFPGVLQSIEVVHAYSFVFSSHSVIVLLLSYNLLLTKMAASADSTHDVVSLLSSPQRDFLLRNNGDQVKIESLKGKKLGVYFSASWCGPCRKFTPTLVEAYNEIVSKGDFEVVFASADENEESFKGYFSKMPWLAIPFSDSETRSRLDELFHVRGIPHLVLLEETGKVVTEDGVDIVRDYGVEAYPFTSTRIQELRAREEEARRNQSVRSLLISPSRDFVISSDGNEILVSELEGKTVGLYFSLNSFQRSSEFTPKLVEVYEKLKAKGENFEVLLIPLDEDEESFKKVLGSVPWLSLPFKDKICGKLVQYFELSTLPTLVIIGPDGKTLNPNVAEAIEDHGVDAYPFTPEKFAELDEILKAREASQTLESVLVSEDHDFLIGKDGVQIPVSELKGKVVLLYFSAHWCPPCRAFLPKLIDAYHEIKAKGNALEVVFISSDKDQASFDEFFGGMPWLALPFGDSRKKFLSRKFKVTGIPKLVAIGSSGQTSTTEARDLVLQYGARAYPFTEEKIQDIEAEEEETAKGWPEKVTHDTHEHELVLTRRRVYYCDGCNEQGYAWSYYCGECDFDLHPKCVLEEDKGSKDDTDVKEEDKSKDGWVCDGEVCKKV 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02750 623 Pfam C1 domain 549 590 IPR004146 -
Phco8g02750 623 SUPERFAMILY Thioredoxin-like 395 503 IPR036249 -
Phco8g02750 623 CDD TryX_like_TryX_NRX 73 202 IPR045870 GO:0004791
Phco8g02750 623 Pfam Thioredoxin-like 410 502 IPR012336 -
Phco8g02750 623 Pfam Thioredoxin-like 250 342 IPR012336 -
Phco8g02750 623 Pfam Thioredoxin-like 91 183 IPR012336 -
Phco8g02750 623 ProSiteProfiles Thioredoxin domain profile. 65 212 IPR013766 -
Phco8g02750 623 ProSiteProfiles Thioredoxin domain profile. 377 517 IPR013766 -
Phco8g02750 623 Gene3D Glutaredoxin 67 204 - -
Phco8g02750 623 Gene3D Glutaredoxin 226 363 - -
Phco8g02750 623 Gene3D Glutaredoxin 385 524 - -
Phco8g02750 623 SUPERFAMILY Cysteine-rich domain 541 591 IPR046349 -
Phco8g02750 623 SUPERFAMILY Thioredoxin-like 236 344 IPR036249 -
Phco8g02750 623 ProSitePatterns Thioredoxin family active site. 414 432 IPR017937 -
Phco8g02750 623 CDD TryX_like_TryX_NRX 393 522 IPR045870 GO:0004791
Phco8g02750 623 PANTHER THIOREDOXIN 55 355 - -
Phco8g02750 623 SUPERFAMILY Thioredoxin-like 76 184 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02750 Phco-Chr8 40570477 40573663 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g02750 8 40570477 40573663 Phco8g02750 8 40570477 40573663 ECH