Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02747 ATGCCCATTTTAATGGTTCTTCATTCTTATGTTAGAGTTGGTTATGAGCTCTTAAGGCCTCTTCAACTAGTTAATGAGAATCCTTTGCCCCTTGACGAAGTGCCTCTCACACTTATTGGGTCACCTCCTTTCTTTGTCTCCGCTTCCTCGTTTTCATTCTTCGCTTCTCTCTCTTCTTCTTTTTCTCTCTCTTCTTCTTTTTCTCTCTCTCTACGCTCTCTGGTTCGAGATCCCTCAAGGGATCCGCTAGCTGAAGGAGAAATGGGGTTGACATTCACCAAGCTTTTCAGTCGGCTTTTTGCCAAGAAGGAAATGCGAATTCTGATGGTTGGTCTTGATGCCGCTGGTAAGACCACCATCCTGTACAAGCTCAAACTTGGAGAGATCGTTACAACAATTCCTACTATTGGGTTCAATGTGGAGACTGTGGAATACAAGAATATTAGCTTCACTGTTTGGGATGTTGGTGGCCAAGACAAGATTCGTCCATTGTGGAGGCACTACTTCCAAAACACACAGGGTCTGATATTTGTTGTAGACAGCAATGACAGGGACAGAGTTGTTGAGGCCAGAGATGAGTTGCATAGGATGTTGAATGAGGATGAACTGAGAGATGCAGTATTGCTTGTATTTGCTAACAAACAAGATCTTCCCAATGCAATGAATGCTGCTGAAATTACCGACAAGCTGGGTCTTCACTCTCTCAGACAACGCCACTGGTACATCCAGAGCACCTGTGCAACCTCTGGGGAGGGTCTTTATGAGGGTTTGGACTGGCTTTCCAACAACATAGCCAACAAGGCTTAG 807 0.4486 MPILMVLHSYVRVGYELLRPLQLVNENPLPLDEVPLTLIGSPPFFVSASSFSFFASLSSSFSLSSSFSLSLRSLVRDPSRDPLAEGEMGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02747 268 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 101 266 IPR027417 -
Phco8g02747 268 FunFam ADP-ribosylation factor 1 88 268 - -
Phco8g02747 268 PRINTS GTP-binding SAR1 protein signature 134 158 IPR006689 GO:0003924|GO:0005525
Phco8g02747 268 PRINTS GTP-binding SAR1 protein signature 106 129 IPR006689 GO:0003924|GO:0005525
Phco8g02747 268 PRINTS GTP-binding SAR1 protein signature 161 186 IPR006689 GO:0003924|GO:0005525
Phco8g02747 268 PRINTS GTP-binding SAR1 protein signature 206 227 IPR006689 GO:0003924|GO:0005525
Phco8g02747 268 CDD Arf1_5_like 105 263 IPR045872 GO:0003924
Phco8g02747 268 Gene3D - 91 268 IPR027417 -
Phco8g02747 268 PANTHER ADP RIBOSYLATION FACTOR-RELATED 88 263 IPR024156 GO:0005525
Phco8g02747 268 SMART arf_sub_2 88 268 - -
Phco8g02747 268 NCBIfam small GTP-binding protein domain 103 243 IPR005225 GO:0005525
Phco8g02747 268 SMART rab_sub_5 105 267 - -
Phco8g02747 268 Pfam ADP-ribosylation factor family 92 264 IPR006689 GO:0003924|GO:0005525
Phco8g02747 268 SMART sar_sub_1 88 264 IPR006689 GO:0003924|GO:0005525
Phco8g02747 268 ProSiteProfiles small GTPase Arf family profile. 98 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02747 Phco-Chr8 40529584 40534996 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g02747 8 40529584 40534996 Phco8g02747 8 40529584 40534996 ECH
Phco4g01437 4 12610968 12612929 Phco8g02747 8 40529584 40534996 PCT