Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02642 ATGGATCCCTCGTCTTCCTCGTCGCTCCCTCCATCGCTTCACCTCGCCATGGCGGCGTTGCTCGGAGCCTCCTTCATGGCCATCTCCGCCTTCTACATGCACCGCCGCACCGTCGACCACGTACTCCACCGCCTCGTCGAACTTCGCCGCAAGCCGCTTGCCGCCTCCGAGGATGACAGCCACGATGACGACGATGATCAGAGCGGGTTCGGAGACGACGACGGAGGAATGGATACGGACGCCGATACGAGGGACTATCGCCGAACCTTTTCGAGGTCCGTGGACGACACCTCAAACGTGCATCGGAGCTACAGATTTTCGTCTTCGATGCCCAACGTGGTTTCCGCAGCGGATTGGTTCCACGAGGACACTAAGAATCGTGCCTCGTCGCTCGAAAATCTTCAATTCGCTCTGCTAGGGCTTCCGTCTAATCGAACGGGTTCCACCAATGGTGAGAGTGCTCAGATTTCGAGTTCGTACAAGAGGATAGCTTCTGTTGGTAGAATTATGACTCCGAGATCACCAGGGTTAAACGCATTTGAAAGTGCTGAGGATTCTGACGAGGAGGAAACACAGCTTGCTGATGACAATACCATTCCTTTCTCAAATACTTACGGAGTAAATTCAAAAATGTGCAATTTGTCTGCTGTTCCATTTGGAGTTGATGATGCAAACTGTGCAAAAAGTCAGTTGTATGGAGAAGTTTCAAAGGAAGAAGCTGGTGCAAATATGAATGGTGTTGTCTCAACTTCTGTACATGTAGCCGGGGATGACAGTGTATTTGCCAATAATGTCTTGCCTGCAAGAAACCCTGTGCATGAGACAAATATAGAAGAGGATGAAGTATGCAAAATGATTCAAGAATGCTTAGATTTGCGTAAGAGATATGTTTACAAGGAAAATATTACATTGAAGACAGAACCAGTGGAAACTAACTTTGACCCATATCATTTTGAACCAGTTGAAGCAACAACACACCACTTTAGGATGGAAGATGGAGTCATGCATGTTTTTGCAAGTAAAACTGATACCGAAGAGCTCTTCCCGGTTGCAAGCTCAACCAGATTTTTTACTGATATGCATTACATTCTGAAAGTTATGTCTATTGGGAATGTTCGCTCTACATGCTACCACAGGCTACGATTTCTTGAGGAAAAATTCCGCCTTCATCTGTTACTAAATGCAGATAGGGAGTTTCTGGCTCAGAAGGGTGCGTCACACCGGGATTTTTACAATATCAGAAAAGTTGATACTCATATTCATCATTCTGCTTGCATGAATCAGAAGCATCTTGTGCGCTTCATCAAGTCAAAATTAAGAAAAGAACCTGATGAGGTTGTTATCTTTAGAGATGGAAAGTATATGACACTTAAGGAGGTTTTTGAGAGTTTGGATTTGACTGGATATGATCTGAATGTTGATTTGTTGGACGTCCATGCAGATAAGACCACATTCCATAGATTTGACAAATTCAACCTTAAGTATAATCCTTGTGGACAGAGCAGACTAAGAGAGATATTTTTAAAGCAGGATAATCTTATCCAGGGAAGGTATCTGGCTGAAGTAACAAAGGAAGTTTTGATAGATCTTGAAGCAAGCAAATATCAGATGGCTGAGTATAGGATCTCTGTCTACGGAAGAAAACAGAGTGAGTGGGATCAGCTGGCTAGTTGGTTTGTTAACAATGCTCTTTACAGTAAGAATGCTGTCTGGCTAATCCAGTTACCAAGGTTATACAATGTGTACAAGAATATGGGAATTGTTACATCTTTTCAGAATATTCTGGATAATGTATTTATTCCTCTATTTGAAGTCACAGTGGATCCAAATTCTCATCCTCAATTACATTTGTTTTTGATGCAGGTGGTTGGATTTGATCTTGTAGATGATGAAAGTAAACCAGAGAGGCGTCCAACTAAGCACATGCCTACTCCAGCTGAGTGGACTAATGACTTCAATCCAGCATATTCTTATTACCTTTATTACAGCTACGCAAACTTGTACACGCTCAACAAGCTGCGAGAATCTAAGGGAATGACCACAATAAAGTTGCGTCCTCACTGTGGAGAGGCAGGTGACAATGATCATTTGGCTGCCGCCTTCCTTCTATGCCATAACATATCTCATGGGATTAATCTACGTAAAACTCCAGTTTTGCAGTACTTGTATTATCTAGCACAGATTGGATTGGCTATGTCACCACTTAGCAATAATTCCCTTTTCTTGGACTATCACCGCAATCCATTGCCAATGTTTTTCCAGCGAGGTTTAAATGTCTCTCTCTCCTCTGATGATCCTTTGCAAATTCATTTGACAAAAGAGGCATTGCTAGAGGAATATAGTGTATGGAAGCTCTCTGCCTGTGATCTATGTGAGATAGCTAGAAATTCTGTCTACCAATCTGGATTTTCTCACCAGGCAAAGTCACACTGGCTTGGGGAAAAATATTTGTTGAGAGGTCCCGAAGGAAATGATATTCATAAGACAAATGTTCCCAGTTTGAGGATTTCTTTCCGACACGAGACATGGAAAGAGGAAATGCAATATATTTATGCTGGTAAAGCCATCTTTCCTGATGATGTATACCCATGA 2592 0.4282 MDPSSSSSLPPSLHLAMAALLGASFMAISAFYMHRRTVDHVLHRLVELRRKPLAASEDDSHDDDDDQSGFGDDDGGMDTDADTRDYRRTFSRSVDDTSNVHRSYRFSSSMPNVVSAADWFHEDTKNRASSLENLQFALLGLPSNRTGSTNGESAQISSSYKRIASVGRIMTPRSPGLNAFESAEDSDEEETQLADDNTIPFSNTYGVNSKMCNLSAVPFGVDDANCAKSQLYGEVSKEEAGANMNGVVSTSVHVAGDDSVFANNVLPARNPVHETNIEEDEVCKMIQECLDLRKRYVYKENITLKTEPVETNFDPYHFEPVEATTHHFRMEDGVMHVFASKTDTEELFPVASSTRFFTDMHYILKVMSIGNVRSTCYHRLRFLEEKFRLHLLLNADREFLAQKGASHRDFYNIRKVDTHIHHSACMNQKHLVRFIKSKLRKEPDEVVIFRDGKYMTLKEVFESLDLTGYDLNVDLLDVHADKTTFHRFDKFNLKYNPCGQSRLREIFLKQDNLIQGRYLAEVTKEVLIDLEASKYQMAEYRISVYGRKQSEWDQLASWFVNNALYSKNAVWLIQLPRLYNVYKNMGIVTSFQNILDNVFIPLFEVTVDPNSHPQLHLFLMQVVGFDLVDDESKPERRPTKHMPTPAEWTNDFNPAYSYYLYYSYANLYTLNKLRESKGMTTIKLRPHCGEAGDNDHLAAAFLLCHNISHGINLRKTPVLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPLPMFFQRGLNVSLSSDDPLQIHLTKEALLEEYSVWKLSACDLCEIARNSVYQSGFSHQAKSHWLGEKYLLRGPEGNDIHKTNVPSLRISFRHETWKEEMQYIYAGKAIFPDDVYP 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02642 863 MobiDBLite consensus disorder prediction 53 84 - -
Phco8g02642 863 MobiDBLite consensus disorder prediction 174 193 - -
Phco8g02642 863 CDD AMPD 356 847 IPR006329 GO:0003876|GO:0032264
Phco8g02642 863 ProSitePatterns Adenosine and AMP deaminase signature. 760 766 IPR006650 GO:0009168|GO:0019239
Phco8g02642 863 Pfam AMP deaminase 313 850 IPR006329 GO:0003876|GO:0032264
Phco8g02642 863 MobiDBLite consensus disorder prediction 59 79 - -
Phco8g02642 863 Gene3D - 326 846 - -
Phco8g02642 863 Gene3D - 426 516 - -
Phco8g02642 863 PANTHER AMP DEAMINASE 178 853 IPR006329 GO:0003876|GO:0032264
Phco8g02642 863 FunFam AMP deaminase 426 516 - -
Phco8g02642 863 SUPERFAMILY Metallo-dependent hydrolases 275 851 IPR032466 -
Phco8g02642 863 NCBIfam AMP deaminase 318 850 IPR006329 GO:0003876|GO:0032264
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02642 Phco-Chr8 38549364 38559326 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g02642 8 38549364 38559326 Phco8g02642 8 38549364 38559326 ECH