Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco8g02640 | ATGGGTGCAGGGGACTACTACAAGATTCTGAAGGTGAACCGCAATGCCTCGGATGAAGAACTCAAGAGGGCATATAAGAGGCTGGCCATGAAGTGGCACCCAGACAAGAACCATCAGCACCAACTTGTTACTAAAGAAGAAGCCGAGGCCAAGTTCAAGCAGGTTTCGGAGGCTTATGATGTTCTCAGTGACCCCAAGAAGCGCCAGATCTATGATTTTTATGGCCAGTATCCCTTGAATTCTATGAAGGAGAAGGAGGAGAAGGGTGACGGGGTTGTTAGGGTCTCCAACAGCGAGAAAGTTGGGGTTGTTGAGAGAAAATTGGTGTGTACCCTTGAAGAACTATACAAAGGTTGCAAAAAGAAGTTGAAGATCTCAAGGACTGTTCATCATGAATTCGGTAAGTTGAAGACTGAGGAAGAGGTCTTGAAAATAGATATCAAACCTGGTTGGAAGAAAGGCACAAAAATAACATTTCCTGGGAAAGGCAACCAAGAAGCACAAGCTAGTGCTCCTGATGATCTAATCTTCGTGGTGGATGAGAAACCACATGCTTTATTCAAGAGGGATGGAAATGATTTGGTTGTCACTCAAAAAATCTTACTTGTAGAGGCTCTAGTGGGAAAGACTCTCAACTTAACAACCTTGGATGGAAGAGAGCTCAGAATTCAAGTGACAGATGTTGTGAAACCAAAATTTGTGTTGGTGGTCCCAAATGAAGGAATGCCCATCTCAAAGGAACTTGGAAAGAAAGGAAACTTGAGAATCAAGTTTGATGTTATGTTCCCATCAAGGCTTACCACACAACAGAAGTATGAGCTGAAAAGGATTCTGAGCAACACTGATGAGTAA | 852 | 0.4319 | MGAGDYYKILKVNRNASDEELKRAYKRLAMKWHPDKNHQHQLVTKEEAEAKFKQVSEAYDVLSDPKKRQIYDFYGQYPLNSMKEKEEKGDGVVRVSNSEKVGVVERKLVCTLEELYKGCKKKLKISRTVHHEFGKLKTEEEVLKIDIKPGWKKGTKITFPGKGNQEAQASAPDDLIFVVDEKPHALFKRDGNDLVVTQKILLVEALVGKTLNLTTLDGRELRIQVTDVVKPKFVLVVPNEGMPISKELGKKGNLRIKFDVMFPSRLTTQQKYELKRILSNTDE | 283 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco8g02640 | 283 | SUPERFAMILY | HSP40/DnaJ peptide-binding domain | 106 | 184 | IPR008971 | GO:0006457|GO:0051082 | |
| Phco8g02640 | 283 | Gene3D | DnaJ domain | 2 | 99 | IPR036869 | - | |
| Phco8g02640 | 283 | SUPERFAMILY | HSP40/DnaJ peptide-binding domain | 187 | 271 | IPR008971 | GO:0006457|GO:0051082 | |
| Phco8g02640 | 283 | CDD | DnaJ_C | 104 | 266 | - | - | |
| Phco8g02640 | 283 | Gene3D | - | 102 | 182 | - | - | |
| Phco8g02640 | 283 | FunFam | DNAJ heat shock family protein | 183 | 278 | - | - | |
| Phco8g02640 | 283 | CDD | DnaJ | 5 | 64 | IPR001623 | - | |
| Phco8g02640 | 283 | Gene3D | - | 184 | 264 | - | - | |
| Phco8g02640 | 283 | SUPERFAMILY | Chaperone J-domain | 4 | 79 | IPR036869 | - | |
| Phco8g02640 | 283 | ProSitePatterns | Nt-dnaJ domain signature. | 52 | 71 | IPR018253 | - | |
| Phco8g02640 | 283 | Pfam | DnaJ domain | 5 | 72 | IPR001623 | - | |
| Phco8g02640 | 283 | SMART | dnaj_3 | 4 | 67 | IPR001623 | - | |
| Phco8g02640 | 283 | FunFam | DnaJ-like subfamily B member 13 | 2 | 100 | - | - | |
| Phco8g02640 | 283 | PRINTS | DnaJ domain signature | 7 | 25 | IPR001623 | - | |
| Phco8g02640 | 283 | PRINTS | DnaJ domain signature | 25 | 40 | IPR001623 | - | |
| Phco8g02640 | 283 | PRINTS | DnaJ domain signature | 67 | 86 | IPR001623 | - | |
| Phco8g02640 | 283 | PRINTS | DnaJ domain signature | 47 | 67 | IPR001623 | - | |
| Phco8g02640 | 283 | Pfam | DnaJ C terminal domain | 105 | 263 | IPR002939 | - | |
| Phco8g02640 | 283 | ProSiteProfiles | dnaJ domain profile. | 5 | 75 | IPR001623 | - | |
| Phco8g02640 | 283 | PANTHER | DNAJ HOMOLOG SUBFAMILY C MEMBER | 1 | 278 | - | - | |
| Phco8g02640 | 283 | FunFam | Dnaj homolog subfamily b member | 100 | 182 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phco8g02640 | Phco-Chr8 | 38532167 | 38533837 | Dispersed/Wgd |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Phco8g02640 | 8 | 38532167 | 38533837 | Phco8g02640 | 8 | 38532167 | 38533837 | ECH |