Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco8g02631 | ATGAAGAGAGCAGCTATCTCCTCTTATTTCCACTGTTTACGTTATAATTATCATAATCCATTTATGGGTTTTGGTCCAAAATGTTTGAATGTGAAATTTTACTCTTTGGGTTCAAGCAACGCCAGACCTTTTCCTGATTACTCCCCAAAAAAGCCTTCAGTTAAAGACACTGACTTTGTGCACCACATTTCCTCCACCATTAAGCAGCGCCGCTCCGAGCCTCTTCGCCGGATTCTCAAGCCCTTTGAGGCAAAGTTCAAGCCTGACTATTTCATTTGGGTTCTTATGAACATCAAGGATGACTATAAACTTGTGTTAGATTTCTTCAACTGGACGCGCCTTCGGAGGGACCCTTCTTTGGAAGCCCTTTGCATTGTGGTTCATATTGCTGTGGCTTCTAAGGACTTGAGAACGGCTCACAGGCTTGTTTTTGAGTTCTGGGGAAAGCCTCATTTGGATGTTGGTTACTTGTTTGCTCAATTTACTGAGAGGTTGATTTATACTTACAAGGACTGGGGTGCACATCCCTTTGTGTTTGATGTGTTCTTTCAAGTTCTCGTTGAAGCAGGGTTGCTTCTAGAAGCAGGTAAACTGTTTGATAAATTGGTCAATTACGGCGTTCTTGTTTCTGTAGATTCTTGTAATTTGTTTCTAGCTAGGCTATCTAACAGTTTTGATGGGAAAAAGATGGCAATTAAGGTGTTCAGAGAGTATCCTGAAGTGGGTGTTTGTTGGAACACCATGTCGTATAATATTATTCTTCATTCACTTTGTCAATTGGGTAGGTTAAAAGAAGCACATAATCTGCTCATACAAATGGAGTTTAGGGGGAGCTTTCCGGATGTTGTAAGTTATAGTGTTATAATTAATGGATACTGTCAGGTTGAACAGATAGGAAAGGTCTTGAAGCTCCTGGAAGAGTTGCAGGGAAAGGGGTGTAAGCCAAATGAATACACATACAATAGCGTAATTTCCCTTCTTTGTAAGACTGGTAGAGTTGTTGAAGCGGAGCAAATCTTGAGGGAGATGATAAATCATAGGATATTTCCTGATAATGTGGTGTATACAACTCTCATCAGTGGGTTCGGCAAGTCTGGGAATGTGTCAGCTAAATACAAACTGTTTGATGAAATGAGGCATAAGAAAATAGTTCCTGATTGTGTGACGTATACTTCCATGATTAACGGACTCTGTGAAGCTGGAAAGGTTGTGGAAGCACGCAAACTGTTTTGTGAAATGTTTGGAAAAGGATTGGAACCAGATGAAGTTACTTATACTGCTCTTATAGATGGGTATTGCAAGGCTGGAGAAATGAAAGATGCATTCTCTCTTCACAACCAGATGGTTGAGAAGGGTCTGATTCCTAATGTTGTCACTTATACAGCATTGGTTGATGGCCTGTGTAAACGTGGTGAGGTAGATATAGCAAATGAGCTTCTTCTTGAAATGTCTGAGAAGGGCCTTCAACCAAATGTCTGCACATATAATGCACTAATCAATGGTCTTTGTAAGGTAGGAAATATAGAGCAAGCCATAAAACTTATGGAAGAAATGGATCTGGCAGGGTTTTATCCTGACACTTTTACATATACTACACTCATGGACGCTTATTGTAAGATGGGTGAAATGGCCAAGGCTCATGAATTGCTGTGGGTTATGGTTGGTAAAAGAATTCAACCTACAATTGTTACTTTCAATGTGCTAATGAATGGGTTTTGCATGTCAGGGATGTTGGAAGATAGTGAAAGACTAATCAAATGGATGTTAGAAAAAGGTATAATGCCGAATGCCACAACATTCAATTTTCTTTTGAAGCAGTACTGTATTAGAAGTAACATGCGTGCTACAACACAGATTTATAAGAGGATGTATGCTCAAGGAGTGATGCCTGACAATAATACATATAATATTTTGATTAAAGGGCATTGTAAAGCTAGAAATATGAAAGAGGCATGGTTTTTGCATAAAGAAATGGTTGAAAAGGGATTTAGTCTAACTGCTGCTTCCTATAATGCTCTTATAAAGGGTTTCTATAAGAGGAAGAAATTTGTGGAGGCTAAGAAGCTATTTAAGGAGATGAGAACTCAAGGATTTGTTGCAGAAAAAGAGATATATGATATTTTTGTTGATGTAAATTATGAAGAAGGGAACTGGGAAAATACTCTTGAGCTTTGTGATGAAGCAATAGAGAAATGTCTTGTTAAGAAAACTTAG | 2214 | 0.3875 | MKRAAISSYFHCLRYNYHNPFMGFGPKCLNVKFYSLGSSNARPFPDYSPKKPSVKDTDFVHHISSTIKQRRSEPLRRILKPFEAKFKPDYFIWVLMNIKDDYKLVLDFFNWTRLRRDPSLEALCIVVHIAVASKDLRTAHRLVFEFWGKPHLDVGYLFAQFTERLIYTYKDWGAHPFVFDVFFQVLVEAGLLLEAGKLFDKLVNYGVLVSVDSCNLFLARLSNSFDGKKMAIKVFREYPEVGVCWNTMSYNIILHSLCQLGRLKEAHNLLIQMEFRGSFPDVVSYSVIINGYCQVEQIGKVLKLLEELQGKGCKPNEYTYNSVISLLCKTGRVVEAEQILREMINHRIFPDNVVYTTLISGFGKSGNVSAKYKLFDEMRHKKIVPDCVTYTSMINGLCEAGKVVEARKLFCEMFGKGLEPDEVTYTALIDGYCKAGEMKDAFSLHNQMVEKGLIPNVVTYTALVDGLCKRGEVDIANELLLEMSEKGLQPNVCTYNALINGLCKVGNIEQAIKLMEEMDLAGFYPDTFTYTTLMDAYCKMGEMAKAHELLWVMVGKRIQPTIVTFNVLMNGFCMSGMLEDSERLIKWMLEKGIMPNATTFNFLLKQYCIRSNMRATTQIYKRMYAQGVMPDNNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNALIKGFYKRKKFVEAKKLFKEMRTQGFVAEKEIYDIFVDVNYEEGNWENTLELCDEAIEKCLVKKT | 737 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco8g02631 | 737 | Gene3D | Tetratricopeptide repeat domain | 606 | 737 | IPR011990 | GO:0005515 | |
| Phco8g02631 | 737 | Pfam | PPR repeat | 669 | 698 | IPR002885 | - | |
| Phco8g02631 | 737 | FunFam | Pentatricopeptide repeat-containing protein At5g39710 | 334 | 439 | - | - | |
| Phco8g02631 | 737 | FunFam | Pentatricopeptide repeat-containing protein At5g39710 | 440 | 545 | - | - | |
| Phco8g02631 | 737 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 386 | 420 | IPR002885 | - | |
| Phco8g02631 | 737 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 596 | 630 | IPR002885 | - | |
| Phco8g02631 | 737 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 421 | 455 | IPR002885 | - | |
| Phco8g02631 | 737 | PANTHER | MEMBRANE-ASSOCIATED SALT-INDUCIBLE PROTEIN-LIKE | 319 | 560 | - | - | |
| Phco8g02631 | 737 | Pfam | PPR repeat family | 420 | 469 | IPR002885 | - | |
| Phco8g02631 | 737 | Pfam | PPR repeat family | 490 | 539 | IPR002885 | - | |
| Phco8g02631 | 737 | Pfam | PPR repeat family | 560 | 608 | IPR002885 | - | |
| Phco8g02631 | 737 | Pfam | PPR repeat family | 280 | 329 | IPR002885 | - | |
| Phco8g02631 | 737 | Pfam | PPR repeat family | 350 | 398 | IPR002885 | - | |
| Phco8g02631 | 737 | Gene3D | Tetratricopeptide repeat domain | 346 | 414 | IPR011990 | GO:0005515 | |
| Phco8g02631 | 737 | Gene3D | Tetratricopeptide repeat domain | 415 | 483 | IPR011990 | GO:0005515 | |
| Phco8g02631 | 737 | Gene3D | Tetratricopeptide repeat domain | 484 | 556 | IPR011990 | GO:0005515 | |
| Phco8g02631 | 737 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 246 | 280 | IPR002885 | - | |
| Phco8g02631 | 737 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 491 | 525 | IPR002885 | - | |
| Phco8g02631 | 737 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 526 | 560 | IPR002885 | - | |
| Phco8g02631 | 737 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 316 | 350 | IPR002885 | - | |
| Phco8g02631 | 737 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 456 | 490 | IPR002885 | - | |
| Phco8g02631 | 737 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 281 | 315 | IPR002885 | - | |
| Phco8g02631 | 737 | NCBIfam | pentatricopeptide repeat | 388 | 422 | IPR002885 | - | |
| Phco8g02631 | 737 | NCBIfam | pentatricopeptide repeat | 423 | 457 | IPR002885 | - | |
| Phco8g02631 | 737 | NCBIfam | pentatricopeptide repeat | 493 | 527 | IPR002885 | - | |
| Phco8g02631 | 737 | NCBIfam | pentatricopeptide repeat | 458 | 492 | IPR002885 | - | |
| Phco8g02631 | 737 | NCBIfam | pentatricopeptide repeat | 634 | 666 | IPR002885 | - | |
| Phco8g02631 | 737 | NCBIfam | pentatricopeptide repeat | 249 | 282 | IPR002885 | - | |
| Phco8g02631 | 737 | NCBIfam | pentatricopeptide repeat | 669 | 699 | IPR002885 | - | |
| Phco8g02631 | 737 | NCBIfam | pentatricopeptide repeat | 353 | 387 | IPR002885 | - | |
| Phco8g02631 | 737 | NCBIfam | pentatricopeptide repeat | 563 | 597 | IPR002885 | - | |
| Phco8g02631 | 737 | NCBIfam | pentatricopeptide repeat | 318 | 351 | IPR002885 | - | |
| Phco8g02631 | 737 | NCBIfam | pentatricopeptide repeat | 283 | 317 | IPR002885 | - | |
| Phco8g02631 | 737 | NCBIfam | pentatricopeptide repeat | 528 | 561 | IPR002885 | - | |
| Phco8g02631 | 737 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 631 | 665 | IPR002885 | - | |
| Phco8g02631 | 737 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 561 | 595 | IPR002885 | - | |
| Phco8g02631 | 737 | Pfam | PPR repeat | 242 | 274 | IPR002885 | - | |
| Phco8g02631 | 737 | Pfam | PPR repeat | 627 | 659 | IPR002885 | - | |
| Phco8g02631 | 737 | Gene3D | Tetratricopeptide repeat domain | 179 | 345 | IPR011990 | GO:0005515 | |
| Phco8g02631 | 737 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 351 | 385 | IPR002885 | - | |
| Phco8g02631 | 737 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 666 | 700 | IPR002885 | - |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Phco8g02631 | 8 | 38392594 | 38394807 | Phco8g02631 | 8 | 38392594 | 38394807 | ECH |