Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02536 ATGAACGCCATTCCAGCACCAATGTTCACCCTACCCCAAGATTGGATGCTGAGAGTAGTTCGGGTGAAGAACATATACGCGCGCTTCTCCTGCTGTAATCACAGACACAGACAAACCCAGAACAATCTACAGAATCAGATTCCGAATATGGCTGACTTGTTGGAATGGCCTAAGAAAGATAACCGTCGCATGCTCCATGTTGTGTACCGTGTTGGTGACCTTGATCGCACCATCAAGTTTTATACAGAATGCTTTGGAATGAAGCTTTTGAGGCATAGAGATATCCCGGAGGAAAAATATGCCAATGCTTTTCTTGGATTTGGCCCTGAAGAATCCCATTTTGTTGTTGAATTAACATATAATTATGGGGTGACCTCGTATGACATAGGGGATGGCTTTGGGCATTTTGCAATTGCGACTAGGGATATTTACAAATTGGTTGAACTCATACGGGCCAAGGGAGGAAACATCACTAGGGAGCCTGGACCAGTTCAGGGTGGGACTACTGTGATTGCCTTTGCGAAGGATCCAGATGGTTACACTTTTGGATTTATCCAAAGACCTACTGTCCATGACCCATTTTGTCAAGTAATGCTTCGTGTTGGAGATTTAGAACGCTCAATTAAGTTTTATGAAAAGGCTTTGGGCATGAAGGTAGTGAGGAAGGTTGATAAGCCTGATTCCAAGTACACTGTAGCTATGCTTGGGTATGGAGAGGAGCACGAGACAACTGTGTTGGAGTTGACGTATAACTATGGTGTCACTGAATACTCCAAGGGCAATGCCTATGCTCAGATTGCTATTGGTACTGATGATGTATACAAGAGTGCTGAGGTAGTTAGCCAAGTTATACAAGAGGTAGGAGGGAAGATTACACGGCAACCAGGGCCAATTCCTGGCCTTAATACAAAAACCGCTTCGTTTTTAGATCCAGATGGTTGGAAAACTGTCTTGGTTGACAATGTTGATTTCTTGGAGGAACTGAAGTGA 990 0.4394 MNAIPAPMFTLPQDWMLRVVRVKNIYARFSCCNHRHRQTQNNLQNQIPNMADLLEWPKKDNRRMLHVVYRVGDLDRTIKFYTECFGMKLLRHRDIPEEKYANAFLGFGPEESHFVVELTYNYGVTSYDIGDGFGHFAIATRDIYKLVELIRAKGGNITREPGPVQGGTTVIAFAKDPDGYTFGFIQRPTVHDPFCQVMLRVGDLERSIKFYEKALGMKVVRKVDKPDSKYTVAMLGYGEEHETTVLELTYNYGVTEYSKGNAYAQIAIGTDDVYKSAEVVSQVIQEVGGKITRQPGPIPGLNTKTASFLDPDGWKTVLVDNVDFLEELK 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02536 329 PANTHER LACTOYLGLUTATHIONE LYASE 45 328 - -
Phco8g02536 329 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 196 315 IPR004360 -
Phco8g02536 329 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 64 183 IPR004360 -
Phco8g02536 329 Gene3D - 190 329 IPR029068 -
Phco8g02536 329 ProSitePatterns Glyoxalase I signature 1. 66 87 IPR018146 GO:0004462|GO:0046872
Phco8g02536 329 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 63 187 IPR037523 -
Phco8g02536 329 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 193 321 IPR037523 -
Phco8g02536 329 FunFam Lactoylglutathione lyase 189 329 - -
Phco8g02536 329 ProSitePatterns Glyoxalase I signature 1. 196 217 IPR018146 GO:0004462|GO:0046872
Phco8g02536 329 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 62 193 IPR029068 -
Phco8g02536 329 Gene3D - 36 187 IPR029068 -
Phco8g02536 329 CDD GlxI_Ni 64 185 - -
Phco8g02536 329 NCBIfam lactoylglutathione lyase 63 187 IPR004361 GO:0004462|GO:0046872
Phco8g02536 329 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 194 321 IPR029068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02536 Phco-Chr8 35821000 35826474 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g02536 8 35821000 35826474 Phco8g02536 8 35821000 35826474 ECH
Phco11g00811 11 5967021 5971646 Phco8g02536 8 35821000 35826474 ECH
Phco8g02536 8 35821000 35826474 Phco11g00811 11 5967021 5971646 PCT