Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02523 ATGGCTTCTTTACAAACCACACTTATACTCTCTTTATCCTCTTCTTGGGTAAGAAAAGTCAACGCTTCTATCCGTCTCCCTATCCCTTCACCGCTCAATTATTCGGTTCCAAAACTGCCATCAAGAACACTGAGGATTCATGAACTTCATGGATCCAAAGACACAATTCCATTAGAGAGGAATCTCCTTACCACACAGATATATGAAGATTTATACAGTCCCACCAACAAATCTAATAACCTCACAATTCAACTCTACGCAATTATAGAGGAAGTCGCTGACATAATTCAAATGCACACAAACATTGGCGAACAAAGAAACAACTGGAACACTCTTCTTCTTAACTCCGTCAACATGATCACTCTCACCGCCACAGCCATGGCTGGTGTTGCTGCAGCCACCAATGGCGACACTGGAACACCTCTTTTGGGTTTGAAACTATCATCCACTCTCTTGTTTTCTGCGGCCACTGGAATGTCACTCATCATGAACAAAATTCAGCCCTCACAACTCGCTGAGGAGCAACGCAATGCTACAAGGCTGTTCAAGCAGCTTCATACCCAAATCCAAACCATAATCGCTCTTGGAAATCCTACAGAGAAAGATCTGAAGACTTCAATGGAGAAGGTGTTGGCAATCGACAGAGCTTACCCACTTCCCTTGTTGGGAGCCATGCTTGACAAGTTTCCCGCAAAATATGAACCTGCAGTCTGGTGGCCTTCGTCTCAGTCCCAAAGAAGAAGTAAAACACAAGAGAGCAAAAGGACTAATAATGGATGGAGTGAAGACCTTGAAAAGGAATTGAGGGAAGTGATTGAAGTGATAAAGAAGAAAGACTGTGAGGACTACGAGAGGCTTGGAAACATAGCGTTGAAGGTGAGCAAGAGTCTTGCAATGGCGGGGCCTTTACTGAGTGGGATTGCAGCAGTGGGGTCTTCGTCTGTGGGGAATGGATCATTGGCGGCATTAGTGCCTCTCATGGCTGGCTCATTGGCTTCAGCAGTGGCAATGAAGTTGGGAAGAAGCGTTTCGGAGCTCAGACGCCTTGCCTCAAAATCTGCTTCCTCTGGTATGGAAGGAATGGTCGTAGAAGAATTCGCCAGCAAGCTCTTTTAA 1116 0.4543 MASLQTTLILSLSSSWVRKVNASIRLPIPSPLNYSVPKLPSRTLRIHELHGSKDTIPLERNLLTTQIYEDLYSPTNKSNNLTIQLYAIIEEVADIIQMHTNIGEQRNNWNTLLLNSVNMITLTATAMAGVAAATNGDTGTPLLGLKLSSTLLFSAATGMSLIMNKIQPSQLAEEQRNATRLFKQLHTQIQTIIALGNPTEKDLKTSMEKVLAIDRAYPLPLLGAMLDKFPAKYEPAVWWPSSQSQRRSKTQESKRTNNGWSEDLEKELREVIEVIKKKDCEDYERLGNIALKVSKSLAMAGPLLSGIAAVGSSSVGNGSLAALVPLMAGSLASAVAMKLGRSVSELRRLASKSASSGMEGMVVEEFASKLF 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02523 371 Coils Coil 261 281 - -
Phco8g02523 371 Pfam Petal formation-expressed 84 336 IPR027949 -
Phco8g02523 371 PANTHER F-BOX PROTEIN WITH A DOMAIN PROTEIN 1 335 IPR027949 -
Phco8g02523 371 MobiDBLite consensus disorder prediction 240 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02523 Phco-Chr8 34811578 34812848 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g02523 8 34811578 34812848 Phco8g02523 8 34811578 34812848 ECH
Phco8g02523 8 34811578 34812848 Phco11g00821 11 6036870 6038168 PCT