Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02505 ATGTGGTGTGACGTGCTGAAGAGGCCAGGCGAAAAGAAAGGAATAAAGAGCAAGGAAGGTGTGTGTGAGAATATGGGGAAAAACATGAACGTGATCTCGTGGTGGGTGTTTGTGACGATCCTGTTGCTTTCTGCTGTGTCCTGTGCACCCAATGATGGGCTGCGTAGGATTGGGCTCAAGAAGATTAAATTGGACCCTAACAACAGGCTTGCAGCTCGAATTGGGTCCAAGGATGATTCTTTCCGTGCTTCTATTAGAAAGTTTCATCTCCAAAACAACTTTGGTGGCACTGAGGACACCGATATTGTTGCCTTAAAGAATTACTTGGATGCTCAGTATTTTGGTGAAATAGCCATTGGAACATCTCCTCAGAAGTTCACTGTCATTTTCGACACAGGCAGCTCTAATTTGTGGGTGCCATCATCCAGATGCACCTTTTCGGTTGCATGCTACTTCCATGCTAAGTATAGGTCTAGCAAATCAAGTACTTACAAGAAAAATGGCACTGCTGCTGCTATTCAATATGGTACCGGAGCAATTTCTGGTTTCTTTAGCTATGACAGTGTTAGAGTTGGCGACATAGTTGTAAAGAACCAGGAATTTATCGAAGCAACTAGGGAGCCGGGTGTTGTATTTTTGGCAGCCAAGTTCGATGGTATACTGGGACTTGGATTTCAAGAGATATCTGTTGGAAATGCTGTTCCAGTGTGGTACAACATGGTTGAACAAGGTCTTATTAAGGAACCAGTATTTTCATTTTGGTTCAACCGCAAACCAGAGGAAGAGGAAGGTGGTGAGATTGTTTTTGGGGGTGTTGACCCTGCTCACTATAAGGGAAAACACACTTATGTGCCCGTGACCAGAAAAGGATATTGGCAGTTTGATATGGGAGATGTACTTATTGGTGGTAAACCCACTGGATATTGTGCTGATGGCTGTTCAGCCATTACAGACTCAGGGACTTCCTTATTGGCCGGTCCAACGACTATAATAACTATGATAAACCATGCAATTGGAGCAGCTGGAGTTATGAGCCAAGAGTGTAAGACCGTTGTTGCAGAGTATGGAAAAACAATTTTGAATTTGCTTTTGGCTGAATCACAGCCGAAGAAGATCTGTTCTCAAATTGGATTGTGTACCTTTGATGGGACTCGTGGTATTGATATGGGCATAGCGAGCGTTGTGGATGAGAATGCAAGAAAATCATCTGGTGGTCTTCATGATGCTGCTTGTTCTGCGTGTGAGATGGCGGTTGTTTGGATGCAGAACCAGGTGAGCCGAAATCAGACACAGGATCAGATACTAAGCTACATCAATCAGCTTTGCGATAAAATGCCTAGCCCAATGGGAGAATCTTCTGTTGACTGTGGGAATATCTCCTCATTACCTGTGGTGTCCTTTACTATTGGTGGAAGAACTTTTGACCTGCTCCCAGAGGAGTACATACTCAAGGTGGGTGAAGGCCCTGTGGCTCAGTGCATTAGTGGCTTTACTGCTATAGATATTCCACCTCCTCGTGGCCCTCTCTGGATCCTTGGTGACGTCTTCATGGGGCGTTATCACACAGTGTTTGATTTTGGTAATCTTAGAGTGGGATTTGCTGATGCAGCTTAA 1614 0.4455 MWCDVLKRPGEKKGIKSKEGVCENMGKNMNVISWWVFVTILLLSAVSCAPNDGLRRIGLKKIKLDPNNRLAARIGSKDDSFRASIRKFHLQNNFGGTEDTDIVALKNYLDAQYFGEIAIGTSPQKFTVIFDTGSSNLWVPSSRCTFSVACYFHAKYRSSKSSTYKKNGTAAAIQYGTGAISGFFSYDSVRVGDIVVKNQEFIEATREPGVVFLAAKFDGILGLGFQEISVGNAVPVWYNMVEQGLIKEPVFSFWFNRKPEEEEGGEIVFGGVDPAHYKGKHTYVPVTRKGYWQFDMGDVLIGGKPTGYCADGCSAITDSGTSLLAGPTTIITMINHAIGAAGVMSQECKTVVAEYGKTILNLLLAESQPKKICSQIGLCTFDGTRGIDMGIASVVDENARKSSGGLHDAACSACEMAVVWMQNQVSRNQTQDQILSYINQLCDKMPSPMGESSVDCGNISSLPVVSFTIGGRTFDLLPEEYILKVGEGPVAQCISGFTAIDIPPPRGPLWILGDVFMGRYHTVFDFGNLRVGFADAA 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02505 537 ProSiteProfiles Saposin B type domain profile. 407 448 IPR008139 -
Phco8g02505 537 FunFam Lysosomal aspartic protease 99 341 - -
Phco8g02505 537 Gene3D Acid Proteases 55 271 IPR021109 -
Phco8g02505 537 Gene3D Acid Proteases 272 537 IPR021109 -
Phco8g02505 537 FunFam Vacuolar aspartic proteinase 408 536 - -
Phco8g02505 537 Pfam Saposin-like type B, region 1 410 446 IPR007856 GO:0006629
Phco8g02505 537 SUPERFAMILY Acid proteases 99 536 IPR021109 -
Phco8g02505 537 Pfam Eukaryotic aspartyl protease 112 535 IPR033121 -
Phco8g02505 537 FunFam Aspartic proteinase A1 343 446 - -
Phco8g02505 537 Gene3D - 343 446 - -
Phco8g02505 537 PANTHER BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED 42 534 IPR001461 GO:0004190|GO:0006508
Phco8g02505 537 Pfam Saposin-like type B, region 2 346 379 IPR008138 -
Phco8g02505 537 ProSiteProfiles Saposin B type domain profile. 343 383 IPR008139 -
Phco8g02505 537 ProSiteProfiles Peptidase family A1 domain profile. 113 534 IPR033121 -
Phco8g02505 537 CDD phytepsin 103 535 IPR033869 GO:0004190
Phco8g02505 537 SUPERFAMILY Saposin 344 446 IPR011001 -
Phco8g02505 537 PRINTS Pepsin (A1) aspartic protease family signature 510 525 IPR001461 GO:0004190|GO:0006508
Phco8g02505 537 PRINTS Pepsin (A1) aspartic protease family signature 119 139 IPR001461 GO:0004190|GO:0006508
Phco8g02505 537 PRINTS Pepsin (A1) aspartic protease family signature 315 326 IPR001461 GO:0004190|GO:0006508
Phco8g02505 537 PRINTS Pepsin (A1) aspartic protease family signature 265 278 IPR001461 GO:0004190|GO:0006508
Phco8g02505 537 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 128 139 IPR001969 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02505 Phco-Chr8 29032934 29038412 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g02505 8 29032934 29038412 Phco8g02505 8 29032934 29038412 ECH
Phco11g00827 11 6081064 6085084 Phco8g02505 8 29032934 29038412 ECH