Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02212 ATGGGGAGAATGGGACAAGACTCAGACCCCAAGTCCAAGTTGGTATTAGAGATTTGCTCCATTTCCACGCGTTCTGTTGTATGTGCTCATCATACACTTCTCTCAAAACCAGCTAACGCAACATTTGTTGACTGGTATTGCATTATTGGAGTGGAAGAAAATGCAGGGGTGAATGCCATTCGCAAGAGGTACCATAAACTGGCCTTACAAGTTCATCCAGATAAGAATAAACACCCCAAGGCTGAAATTGCTTTCAAGCTCGTTTCTGAGGCCTATGCATGTCTATCTAATGCAGCAAAGAGAAAAGACTTTGACTTGGAGAGATATAAGCATTTCTGCATCGAGTGCAGAAGAATTCCGTATACATCGAGCAATGTCCCTGTCAATTCAGGTGGATCAGGTTTTAAGGCATGGAACATCATCACCAGATCAAGATCTTTTAAACTTTGGAGAAATATTAGGGAAATGAGAGAAAGATTCATGGACGAGGCTAAGGTGATAGAGAACTGTTTGCGAACAAATTCAATGTCAAGGAAAGAATCTCCACGCCAAAATCCGGTTGGCTTTCTACATAGAAGCAAGTCGCTTCATAGATATGAGAAAGAAACCCCTGTTTTTGATCCGTCGGATTATTTGTACCAGGGGTACCCTCATCTGAGGAGCAATATTTACAAGAATTCTTCAACTTTTTGGTACATGCAGAGAAATAGTATGCATCACAATGAAAAAGGAGGTGCTCTGCATGCCTCCCCTGTTTTTGAGGTCCAATCTAGGAGTTTGTTTGCTGGCAAATTCGCTTTTGTTCCGTCAAAATGTTAG 819 0.4164 MGRMGQDSDPKSKLVLEICSISTRSVVCAHHTLLSKPANATFVDWYCIIGVEENAGVNAIRKRYHKLALQVHPDKNKHPKAEIAFKLVSEAYACLSNAAKRKDFDLERYKHFCIECRRIPYTSSNVPVNSGGSGFKAWNIITRSRSFKLWRNIREMRERFMDEAKVIENCLRTNSMSRKESPRQNPVGFLHRSKSLHRYEKETPVFDPSDYLYQGYPHLRSNIYKNSSTFWYMQRNSMHHNEKGGALHASPVFEVQSRSLFAGKFAFVPSKC 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02212 272 PANTHER BNAC03G44070D PROTEIN 24 236 - -
Phco8g02212 272 SUPERFAMILY Chaperone J-domain 38 108 IPR036869 -
Phco8g02212 272 FunFam Chaperone protein dnaJ 49 isoform A 43 166 - -
Phco8g02212 272 PRINTS DnaJ domain signature 46 64 IPR001623 -
Phco8g02212 272 PRINTS DnaJ domain signature 64 79 IPR001623 -
Phco8g02212 272 PRINTS DnaJ domain signature 80 100 IPR001623 -
Phco8g02212 272 ProSitePatterns Nt-dnaJ domain signature. 85 104 IPR018253 -
Phco8g02212 272 ProSiteProfiles dnaJ domain profile. 44 108 IPR001623 -
Phco8g02212 272 CDD DnaJ 44 97 IPR001623 -
Phco8g02212 272 SMART dnaj_3 43 100 IPR001623 -
Phco8g02212 272 Pfam DnaJ domain 44 105 IPR001623 -
Phco8g02212 272 Gene3D DnaJ domain 43 165 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02212 Phco-Chr8 23707777 23708976 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g02212 8 23707777 23708976 Phco8g02212 8 23707777 23708976 ECH
Phco8g02212 8 23707777 23708976 Phco7g02972 7 48508181 48509429 PCT