Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02171 ATGTTTGGTTCGTGCTTCTCAGCGTCCAGGACCATGCGTTACAGAACGTGCGGCATTGGCTTCATTAATTTTTTTGTGTTGTTTGGTTTGGTTTTTGTTAGTCTAAGGTTGGGCGCTGCGGTGTGGAGAAAGCGCGAAAGGGTGGTGGAGATGGACATAGACCACTTGCCCAAGAACGCTGCTAACTACACTGCGTTAACGCCGTTGTGGTTTCTGGAAAGAGCAGCTACGGTGCACCCTACCAGAAACTCCCTCATCCATGGATCTCGTCGCTACACGTGGAAACAGACCTATCACCGTTGCCGTCGATTCGCCTCCGCTCTTTCCAACAATTCCATCGGACCAGGAAACACTGTAGCTGTTATTGCACCCAATATTCCAGCTCTTTATGAAGCTCATTTTGGGGTTCCAATGGCAGGGGCTGTGTTGAATCCTGTTAATATTAGACTAAATGCATCCACCGTAGCCTTTCTTCTTGGTCATTGCTCTGCTGCAGCTGTAATAGTTGATCAAGAGTCCTTTTCTTTGGCGGAAGAAGCTTTGAAGATATGGTCTGAGAAAGCCAAAACCTTTAGCCCTCCACTTTTAATAGTCATTGGTGATGAAAATTGCGACCCTAAGTCACTTACATATGCTGTGGGCAAAGGAGCCATTGAATATGAGGATTTTCTTCAGGGTGGTGATCCTGAATATGCATGGAAACCCCCTGAGGATGAGTGGCAGAGTATTGCTTTGGGTTACACATCTGGTACCACTGCTAGTCCGAAGGGTGTGGTATTACATCACCGTGGAGCCTATCTCATGTCTCTGAGTGGAGCTCTTATTTGGGGAATGACTGAAGGTGCTGTGTATCTTTGGACACTCCCCATGTTTCATTGCAATGGTTGGTGTTACACTTGGACACTTGCAGCTCTGTTTGGTACTAACATATGCCTTCGCCAGGTAACAGCGAAGGCAGTATACCAAGCCATTGCCAAGTATAAAGTTACTCATTTTTGTGCAGCACCAGTGGTTCTTAACACAATAATCAATGCCCCACCTGAGGAAACCATACTTCCCCTCCCGCATGTTGTGCATGTGAATACAGCTGGGGCTGCTCCTCCTCCTTCTGTTCTTTCTGGCATGTCTGAACGAGGATTTCGTGTCACTCACACTTATGGTCTCTCTGAAACCTATGGCCCCTCTGTCTATTGTGCCTGGAAACCAGAATGGGAGTTACTTCCTCCTGAACGCCAAGCACAGCTCAACGCAAGACAAGGGGTTAGGTACATTGGCTTGGAAGGCTTGGAAGTGGTAAACACAAAAACCATGCAACCTGTTCCTGCTGATGGTAAAACTGTAGGTGAGATTGTGATGCGGGGCAATTGTGTGATGAAAGGCTACTTAAAGAACCCTAAAGCTAATGAGGAGACCTTTGCAAATGGATGGTTTCATTCTGGGGATCTTGCTGTGAAGCATCCAGATGGATATATAGAAATTAAAGACAGATCAAAGGACATCATCATCTCTGGTGCTGAAAATATCAGCAGTGTGGAGGTAGAGAACGCTCTTTACTCTCATCCTGTAATACTGGAAGCAGCAGTGGTTGCAAGGGCAGATGAGAAATGGGGTGAGTCTCCTTGTGCTTTTGTGACATTGAAGTCAGGAATGGATAAAAGTAATGAACAACGTATAACTGAGGATATATTGAAGTTCTGCAAGGCCAAGATGCCTGCTTATTGGGTTCCAAAATCCTTTGTATTTGGACCCTTACCTAAGACAGCTACTGGGAAGGTACAGAAACATTTACTGAGGGCTAAGGCAAAACAGATGGGACCTGTTAAGATCAGCAAGTTATAA 1839 0.4589 MFGSCFSASRTMRYRTCGIGFINFFVLFGLVFVSLRLGAAVWRKRERVVEMDIDHLPKNAANYTALTPLWFLERAATVHPTRNSLIHGSRRYTWKQTYHRCRRFASALSNNSIGPGNTVAVIAPNIPALYEAHFGVPMAGAVLNPVNIRLNASTVAFLLGHCSAAAVIVDQESFSLAEEALKIWSEKAKTFSPPLLIVIGDENCDPKSLTYAVGKGAIEYEDFLQGGDPEYAWKPPEDEWQSIALGYTSGTTASPKGVVLHHRGAYLMSLSGALIWGMTEGAVYLWTLPMFHCNGWCYTWTLAALFGTNICLRQVTAKAVYQAIAKYKVTHFCAAPVVLNTIINAPPEETILPLPHVVHVNTAGAAPPPSVLSGMSERGFRVTHTYGLSETYGPSVYCAWKPEWELLPPERQAQLNARQGVRYIGLEGLEVVNTKTMQPVPADGKTVGEIVMRGNCVMKGYLKNPKANEETFANGWFHSGDLAVKHPDGYIEIKDRSKDIIISGAENISSVEVENALYSHPVILEAAVVARADEKWGESPCAFVTLKSGMDKSNEQRITEDILKFCKAKMPAYWVPKSFVFGPLPKTATGKVQKHLLRAKAKQMGPVKISKL 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02171 612 Pfam AMP-binding enzyme C-terminal domain 512 591 IPR025110 -
Phco8g02171 612 SUPERFAMILY Acetyl-CoA synthetase-like 56 602 - -
Phco8g02171 612 Pfam AMP-binding enzyme 72 503 IPR000873 -
Phco8g02171 612 CDD ttLC_FACS_AEE21_like 63 599 - -
Phco8g02171 612 FunFam 2,3-dihydroxybenzoate-AMP ligase 498 605 - -
Phco8g02171 612 Gene3D - 499 607 IPR045851 -
Phco8g02171 612 FunFam Long-chain-fatty-acid--CoA ligase FadD 53 498 - -
Phco8g02171 612 PANTHER ACYL-ACTIVATING ENZYME 57 607 - -
Phco8g02171 612 Gene3D - 52 498 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02171 Phco-Chr8 23279435 23288022 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g02171 8 23279435 23288022 Phco8g02171 8 23279435 23288022 ECH