Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02148 ATGAACGCCCTCCCTTCCTCTTCCTCTTCCACCTTCGCTTTCGTAACTCAGTCCAAGAACATATTCAAGCTCACACATAAAGTTCCCATTTTGCCCCTACACTCACATGCTCCGTGTTGCTCTCTCAGCGACTCGTCCTCCTCGTATACCACGGTGCTGGACAAAAGTGCCATTTCATCGGAACAGAATTCAAGAAATGCAGTTTCGCCCGAAGACTCGGGCTCCGAGGAAGTCCTTGCGGTTCGCCGGCCGGTGACAGATTTTTCCGGCCAAGAGGAGGAAGAGGAGGAGAATGAGGCGGAGGACGGTGGTGACGCGAAGGCTTCGGCGATCGACGCGGGGCTGTCGAGATTCGCGAAGAAGATGCCCATGTTTGAACCTGAGAGGATGGAATCGAAAGAGAGACCCCTCACGGTGAATTTGGACTTGGCGTTATACAGGGCAAAACTTATAGCTAGAAGAAGCTTTCGATATGAAGAAGCAGAGGCGTTGCTTCAAAAGTGTATAAGCTGTTGGCCTGAAGATGGTCGACCTTACGTGGTACTTGGAAAGATTTTGAGCAAGCAATCGAAAACAGGTGATGCTAGAGAGATATACGAGAAGGGTTGCCAGGCTACGCAGGGTGAAAATGCCTACATTTGGCAGTGCTGGGCTGTTCTTGAAATGCAAATGGGAAATATCAGGAGAGCAAGAGAGTTGTTTGATGCTGCCACGGTTGCTGATAAGAAGCATGTTGCTGCTTGGCATGGATGGGCAGTTCTAGAGTTAAAGCAGGGAAATATAAAGAAGGCAAGGAGTCTACTCGGTAAAGGTCTTCAATATGGTGGACAGAATGAGTACATATACCAGACACTTGCACTGCTTGAAGCTAGAGCAAAAAGATATCAGCAGGCTCGTTATTTATTCAATCAGGCCACAAAGTGTAATCCTAATAGCTGTGCTAGTTGGCTTAGTTGGGCACAAATGGAGGTGGAACAGGAAAACTACCGTGCTGCTAGGAAATTGTTTGAGAAAGCAGTACAGGCTAGTCCTAAAAATAGGTTTGCTTGGCATGTATGGGGCGTTTTTGAAGCAAACCTTGGCAACATTGACAAGGGAAGAAAACTTTTAAAGATAGGCCACACTCTAAATCCGAGGGATGCTGTTCTACTTCAATCTCTTGCTTTATTAGAATATCAACACTCAACTGCAAACCTTGCACGGGTTTTGTTCAGGAGAGCGTCAGAATTGAATCCAAGGCACCAACCTGTTTGGTTTGCTTGGGGTTGGATGGAATGGAAGGAAGGAAACATGAATAAAGCCAGAGAATTCTACCAAAAAACACTATCAATTGATCAGAACAGTGAAACTGCAGCCAGATGTCTTCAGGCTTGGGGTGTTCTGGAGCAGAGGGTTGGCAATCTTTCAGCTGCACGTAGGTTATTTAAATCCTCGCTGAATATAAATTCTCAGAGTTATGTCACATGGATGACTTGGGCAACAATGGAGGAAGAACAAGGAAACTCTGTGCGTGCTGAAGAGATTCGTAATCTCTATTTCCAACAGCGAACAGAAGTTGTAGATGATGCTACATGGGTTATGGGATTCTTAGATATTTTAGACCCAGCCATTGACAGTTTAAAGACGCTCCTCAAGCTCAGCCCAAATTCCTACAACATGCCGTTTAATTCATTGAGAAATATTGCGGGATCAAATAAAAACAGAGGCGATTTTTCCAGTGACGACGACAATGATGATGAGGATGATGCAAATGGTGAAAGTGACTTCAATTTAGATGCTTTCATTATGAAAAGACTATCCTTAGATTCCTCCAATCTGGAAGTTCAGTTGGAAGCACCCAAAATTTCTTCTGACAAGACAATTCCATCTGGTAGAAGGATATGGCGACCAAATTACAGAATTGCTAAACTGCAAGTCCAAAGAAATGTTGTTTAG 1935 0.4475 MNALPSSSSSTFAFVTQSKNIFKLTHKVPILPLHSHAPCCSLSDSSSSYTTVLDKSAISSEQNSRNAVSPEDSGSEEVLAVRRPVTDFSGQEEEEEENEAEDGGDAKASAIDAGLSRFAKKMPMFEPERMESKERPLTVNLDLALYRAKLIARRSFRYEEAEALLQKCISCWPEDGRPYVVLGKILSKQSKTGDAREIYEKGCQATQGENAYIWQCWAVLEMQMGNIRRARELFDAATVADKKHVAAWHGWAVLELKQGNIKKARSLLGKGLQYGGQNEYIYQTLALLEARAKRYQQARYLFNQATKCNPNSCASWLSWAQMEVEQENYRAARKLFEKAVQASPKNRFAWHVWGVFEANLGNIDKGRKLLKIGHTLNPRDAVLLQSLALLEYQHSTANLARVLFRRASELNPRHQPVWFAWGWMEWKEGNMNKAREFYQKTLSIDQNSETAARCLQAWGVLEQRVGNLSAARRLFKSSLNINSQSYVTWMTWATMEEEQGNSVRAEEIRNLYFQQRTEVVDDATWVMGFLDILDPAIDSLKTLLKLSPNSYNMPFNSLRNIAGSNKNRGDFSSDDDNDDEDDANGESDFNLDAFIMKRLSLDSSNLEVQLEAPKISSDKTIPSGRRIWRPNYRIAKLQVQRNVV 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02148 644 MobiDBLite consensus disorder prediction 566 586 - -
Phco8g02148 644 ProSiteProfiles TPR repeat profile. 279 312 IPR019734 GO:0005515
Phco8g02148 644 FunFam PsbB mRNA maturation factor Mbb1 384 532 - -
Phco8g02148 644 Pfam Tetratricopeptide repeat 417 447 IPR019734 GO:0005515
Phco8g02148 644 ProSiteProfiles TPR repeat profile. 313 346 IPR019734 GO:0005515
Phco8g02148 644 FunFam Uncharacterized protein 126 383 - -
Phco8g02148 644 SMART hat_new_1 190 223 IPR003107 GO:0006396
Phco8g02148 644 SMART hat_new_1 225 257 IPR003107 GO:0006396
Phco8g02148 644 SMART hat_new_1 327 359 IPR003107 GO:0006396
Phco8g02148 644 SMART hat_new_1 293 325 IPR003107 GO:0006396
Phco8g02148 644 SMART hat_new_1 395 427 IPR003107 GO:0006396
Phco8g02148 644 SMART hat_new_1 429 464 IPR003107 GO:0006396
Phco8g02148 644 SMART hat_new_1 259 291 IPR003107 GO:0006396
Phco8g02148 644 SMART hat_new_1 466 498 IPR003107 GO:0006396
Phco8g02148 644 MobiDBLite consensus disorder prediction 59 107 - -
Phco8g02148 644 Pfam Tetratricopeptide repeat 285 346 - -
Phco8g02148 644 Pfam Tetratricopeptide repeat 220 268 - -
Phco8g02148 644 PANTHER PROTEIN HIGH CHLOROPHYLL FLUORESCENT 107 6 631 IPR044624 GO:0003729|GO:0006397
Phco8g02148 644 SUPERFAMILY TPR-like 150 391 IPR011990 GO:0005515
Phco8g02148 644 ProSiteProfiles TPR repeat profile. 415 448 IPR019734 GO:0005515
Phco8g02148 644 SUPERFAMILY TPR-like 367 556 IPR011990 GO:0005515
Phco8g02148 644 Gene3D Tetratricopeptide repeat domain 126 383 IPR011990 GO:0005515
Phco8g02148 644 Gene3D Tetratricopeptide repeat domain 384 534 IPR011990 GO:0005515
Phco8g02148 644 SMART tpr_5 245 278 IPR019734 GO:0005515
Phco8g02148 644 SMART tpr_5 176 209 IPR019734 GO:0005515
Phco8g02148 644 SMART tpr_5 142 175 IPR019734 GO:0005515
Phco8g02148 644 SMART tpr_5 347 380 IPR019734 GO:0005515
Phco8g02148 644 SMART tpr_5 415 448 IPR019734 GO:0005515
Phco8g02148 644 SMART tpr_5 381 414 IPR019734 GO:0005515
Phco8g02148 644 SMART tpr_5 313 346 IPR019734 GO:0005515
Phco8g02148 644 SMART tpr_5 211 244 IPR019734 GO:0005515
Phco8g02148 644 SMART tpr_5 279 312 IPR019734 GO:0005515
Phco8g02148 644 SMART tpr_5 452 485 IPR019734 GO:0005515
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g02148 8 23029149 23033908 Phco8g02148 8 23029149 23033908 ECH