Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02133 ATGGATCTCTTCCCAGTTAAGAAGCAGCAATCCGAGAAACCAATGGACGCCGAAAAGACCAAGGACTTCGAGCGCTTTGATGTTGTAATGGACGACACAGACCATCGGTTTCGAGACTCAAACGATGGGAAGAGCTTCAACGATTCAAGGAGTTCACTTTACAAAACCATCATGAGAGAGTGGAAGATTCTGGAGAAGAACTTGCCGGAATCAATCTACGTGAGGGCGTACGAGCGACGTATTGACCTAATGAGGGCTGTGATCGTAGGCGCCAAGGGTACACCGTACCACGATGGTCTCTTCTTCTTCGACATCGTGTTTCCTTTGGATTACCCCAAGCATCCTCCCAGGCTGCATTACCACTCTTTCGGGTACAGACTGAACCCTAATCTGTACAGCAACGGAAGGGTGTGCTTGAGCCTGCTGAACACGTGGTTCGGGAAAAAGACGGAGAGGTGGGATCCATCCGAGTCGACGATGCTGCAAGTGTTGCTCTCGATCCAAGCGCTGGTTCTGAACGACAAACCGTTTTTCAACGAGCCTGGTGTGGAAGGTTTGGCGAGTTTCTTACCGAACTTGGAGAAGAAGTCTTGCGTGTACAACGAGAGAGCGTATTTTAGCACTTGCAAAACCACCTCCCAACTGCTTCGGAGGCCACCTCGGAACTTCGAAGAGTTCGTGAGTTGCCACTTTCGCCAGCGAGCGGCTCGCATAATCGAGGCGAACAGGCAGTACGTGAGTGGGCGCGTGAGGGTCGGGTATTACTTGTGCGAGTCGGCTCCGTCTTCTTCTTCGGGGGTTTACGTTTCGCAGGAGTTCAAACACTTGATGAAGGACTTTTCCCCTGGGTTTGTTCACACGCTTCGACGGAACGATTCTCCTTCGGACGGTGTTGTTGGTTTGGGGTATACGGCGGGGTACTTTGTTGTGCGATGGGATGACGCCGATAACGACAGCATTGAGGAATCTGAAAGCAAAGGCGGCGGATTCTTCAAAACGGTTATGGATAAGATCAAAAAGTCTTTTGGATGGAAGAAAAATATTGGGAAAATTAATCAATGA 1062 0.5009 MDLFPVKKQQSEKPMDAEKTKDFERFDVVMDDTDHRFRDSNDGKSFNDSRSSLYKTIMREWKILEKNLPESIYVRAYERRIDLMRAVIVGAKGTPYHDGLFFFDIVFPLDYPKHPPRLHYHSFGYRLNPNLYSNGRVCLSLLNTWFGKKTERWDPSESTMLQVLLSIQALVLNDKPFFNEPGVEGLASFLPNLEKKSCVYNERAYFSTCKTTSQLLRRPPRNFEEFVSCHFRQRAARIIEANRQYVSGRVRVGYYLCESAPSSSSGVYVSQEFKHLMKDFSPGFVHTLRRNDSPSDGVVGLGYTAGYFVVRWDDADNDSIEESESKGGGFFKTVMDKIKKSFGWKKNIGKINQ 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02133 353 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 52 211 IPR000608 -
Phco8g02133 353 FunFam Putative ubiquitin-conjugating enzyme E2 38 13 291 - -
Phco8g02133 353 Pfam Ubiquitin-conjugating enzyme 57 177 IPR000608 -
Phco8g02133 353 CDD UBCc 54 204 IPR000608 -
Phco8g02133 353 SMART ubc_7 55 213 - -
Phco8g02133 353 SUPERFAMILY UBC-like 45 220 IPR016135 -
Phco8g02133 353 Gene3D Ubiquitin Conjugating Enzyme 8 283 IPR016135 -
Phco8g02133 353 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 8 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02133 Phco-Chr8 22879140 22880201 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g02133 8 22879140 22880201 Phco8g02133 8 22879140 22880201 ECH