Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02127 ATGTGCCCTTCTGGCCGCATTCTCACCACCCAGGCCGCGGCCTCCGACTTCCGCCCCGCATTCGAAGTCCTCGACGCCGATCGCGACGGCAAAATAAGCCGCGACGACCTCCGCGCCTTCTACGCCGGTGTTCATGGCGGAGTCAGCGGCGGAGATGAGTTGATCGGGGCTATGATGACGGTGGCGGACACGAACAAGGACGGGTTCGTGGAGTACGAGGAGTTTGAGCGCGTGGTGACGGGAGACGCGGAGACACTGCCCGTGGGTAGTGGGGCCATGGAGGACGTGTTCAGGGTCATGGACAAGGACGGCGACGGCAAGCTCAGCCACCGCGACCTTAAGGCTTATATGTCCTGGGCGGGCTTTCCCGCAACCGACGAAGACATCAACGCCATGATACTTTTCGGTGGCGGCGACAAAAATGGCGGCGTGACGTTCGATGGTTTGCTTCGTATATTGGCGCTTGATTCTGCCTACGCTAATTAA 486 0.6029 MCPSGRILTTQAAASDFRPAFEVLDADRDGKISRDDLRAFYAGVHGGVSGGDELIGAMMTVADTNKDGFVEYEEFERVVTGDAETLPVGSGAMEDVFRVMDKDGDGKLSHRDLKAYMSWAGFPATDEDINAMILFGGGDKNGGVTFDGLLRILALDSAYAN 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02127 161 PANTHER CALCIUM BINDING PROTEIN 14 78 - -
Phco8g02127 161 Pfam EF-hand domain pair 17 79 IPR002048 GO:0005509
Phco8g02127 161 FunFam Calcium-binding protein CP1 10 79 - -
Phco8g02127 161 ProSiteProfiles EF-hand calcium-binding domain profile. 50 85 IPR002048 GO:0005509
Phco8g02127 161 ProSitePatterns EF-hand calcium-binding domain. 101 113 IPR018247 -
Phco8g02127 161 Gene3D - 7 159 - -
Phco8g02127 161 Pfam EF hand 93 115 IPR002048 GO:0005509
Phco8g02127 161 ProSitePatterns EF-hand calcium-binding domain. 25 37 IPR018247 -
Phco8g02127 161 ProSiteProfiles EF-hand calcium-binding domain profile. 88 123 IPR002048 GO:0005509
Phco8g02127 161 ProSitePatterns EF-hand calcium-binding domain. 63 75 IPR018247 -
Phco8g02127 161 SMART efh_1 92 120 IPR002048 GO:0005509
Phco8g02127 161 SMART efh_1 16 44 IPR002048 GO:0005509
Phco8g02127 161 SMART efh_1 128 156 IPR002048 GO:0005509
Phco8g02127 161 SMART efh_1 54 82 IPR002048 GO:0005509
Phco8g02127 161 CDD EFh 16 80 IPR002048 GO:0005509
Phco8g02127 161 CDD EFh 94 154 IPR002048 GO:0005509
Phco8g02127 161 SUPERFAMILY EF-hand 13 154 IPR011992 -
Phco8g02127 161 ProSiteProfiles EF-hand calcium-binding domain profile. 12 47 IPR002048 GO:0005509
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g02127 8 22768301 22768786 Phco8g02127 8 22768301 22768786 ECH