Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02116 ATGAACACCGATAACAGTTCGGGAAGCGAAAAACTCGACAACGCACCCATGCAAATGGATTCCGGCGATTCTTCCGGTGGTCAAGTAGAAGACAAGGAAAAGGAAAAGGAGGAACTGACAGAGACTATGAACAAGCTGCATATTGAAGGATCATCTTCTGGGAATGGACTTCCTAACTTCCGAAGAAAACCTGTCATCATTATTGTTGTTGGAATGGCAGGAAGTGGGAAAACAACACTCATGCATAGATTGGTTTGTCATACACATATGAAAAACATCCGGGGTTATGTGGTGAATCTTGACCCTGCCGTCATGACACTGCCATATGCTGCTAACATTGATATAAGAGACACTGTGAAATATAAAGAAGTCATGAAGCAGTTTAACCTAGGCCCTAATGGTGGAATTTTGACTTCCCTGAACTTGTTTGCTACCAAGTTTGACGAGGTCATTTCTGTAATTGAGAGACGGGCAGATCAACTTGACTATGTTCTTGTGGACACCCCTGGTCAGATTGAAATATTTACCTGGTCTGCTTCGGGTGCTATCATTACAGAAGCTTTTGCATCCACATTTCCCACTGTAGTGGCCTATGTAGTTGATACACCTCGTTCAGAAGATCCTACAACTTTCATGAGCAATATGTTGTATGCTTGCAGTATCCTCTATAAGACAAGGTTACCTCTCATCTTGACATTCAACAAAGTTGATGTAGCAGCACATCAGTTTGCATTGGAGTGGATGGAGGATTTTGAGACATTCCAAGCGGCAGCAAGTTCAGATCAGTCATACACGTCAACTTTAACTCAAAGTCTTTCTCTTGTGCTTGATGAATTCTACAACAATTTGAAATCAGTTGGAGTTTCTGCAGTTTCTGGTGTAGGAATGGAAGCCTTCTTTAAAACTGTAGAAGCCAGTGCAGAGGAATACATGGAAACCTACAAGGCTGATCTTGATAAAAGACGTGAAGAGAAGCAACGTTTGGAGGAGGACCGCAGGAGGGGCGACATGGATAAACTGAGGAGGGACATGGAGAAATCTGGGGGGGAAACCGTAGTTTTGAACACTGGTTTGAAGGACAAACAGAAAAGTAAAAGTATGATGGATGAGGAAGATGAGGTTGAGGAGATGGATGATGATGATTTGGGGATATATACTGAAGATGATGATGCTATAGATGAGGATGAAGATGAAGATGAGGAGGTTGATAAATTCGGCTTCTGA 1224 0.424 MNTDNSSGSEKLDNAPMQMDSGDSSGGQVEDKEKEKEELTETMNKLHIEGSSSGNGLPNFRRKPVIIIVVGMAGSGKTTLMHRLVCHTHMKNIRGYVVNLDPAVMTLPYAANIDIRDTVKYKEVMKQFNLGPNGGILTSLNLFATKFDEVISVIERRADQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTVVAYVVDTPRSEDPTTFMSNMLYACSILYKTRLPLILTFNKVDVAAHQFALEWMEDFETFQAAASSDQSYTSTLTQSLSLVLDEFYNNLKSVGVSAVSGVGMEAFFKTVEASAEEYMETYKADLDKRREEKQRLEEDRRRGDMDKLRRDMEKSGGETVVLNTGLKDKQKSKSMMDEEDEVEEMDDDDLGIYTEDDDAIDEDEDEDEEVDKFGF 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02116 407 MobiDBLite consensus disorder prediction 371 407 - -
Phco8g02116 407 FunFam GPN-loop GTPase 1 64 322 - -
Phco8g02116 407 PANTHER XPA-BINDING PROTEIN 1-RELATED 68 324 IPR004130 -
Phco8g02116 407 Coils Coil 29 49 - -
Phco8g02116 407 Coils Coil 311 331 - -
Phco8g02116 407 CDD GPN1 65 305 IPR030230 GO:0003924
Phco8g02116 407 Gene3D - 64 322 IPR027417 -
Phco8g02116 407 MobiDBLite consensus disorder prediction 26 40 - -
Phco8g02116 407 Pfam Conserved hypothetical ATP binding protein 69 307 IPR004130 -
Phco8g02116 407 MobiDBLite consensus disorder prediction 323 407 - -
Phco8g02116 407 MobiDBLite consensus disorder prediction 323 348 - -
Phco8g02116 407 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 304 IPR027417 -
Phco8g02116 407 MobiDBLite consensus disorder prediction 1 25 - -
Phco8g02116 407 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02116 Phco-Chr8 22582113 22585212 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g02116 8 22582113 22585212 Phco8g02116 8 22582113 22585212 ECH