Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02107 ATGGCAAAATTGAAGCCAGTGATTCTATGCTTCTTTCTCCAAGCCATTGTTGTTATGAATATAATACCAGGAAGCGACTGCAGAAGCTTCCTTCCAAACGATGAAAGTCTGATAGAGAGCACTTGCAAGAAGACCCCCAACTACAATCTTTGCCTTCAATATCTCAAGGCAAACCCTGGAAGCTCCACTGCTAGTGTCTCAGGGCTGGCTCTTATCATGGTAAACGTGATGAAAGCCAAAGCATATGATGCCTTGAAAATAATTCATGACTTGCAAAAGAAGGGAGCAGGACCTAAGCAGCAAGGAGCCCTCAAGTCTTGTGCTAGTAATTACAACGCAGTGTTGGTAGCTGACATTCCAGAAGCCACTGAGGCTCTGCAGAAAGGGGATCCCAAGTTTGCTGAAAATGGGGCTAATGATGCTGCTAATGAGGCTACCTATTGTGAGGATGAATTCTCTGGGAATTCTCCACTCACCAAACAGAACAATGCTATGCACGATGTTGCTGCTGTTACTGCTGCTATTGTTAGACTGCTGCTCTAG 543 0.4494 MAKLKPVILCFFLQAIVVMNIIPGSDCRSFLPNDESLIESTCKKTPNYNLCLQYLKANPGSSTASVSGLALIMVNVMKAKAYDALKIIHDLQKKGAGPKQQGALKSCASNYNAVLVADIPEATEALQKGDPKFAENGANDAANEATYCEDEFSGNSPLTKQNNAMHDVAAVTAAIVRLLL 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02107 180 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 179 IPR035513 -
Phco8g02107 180 FunFam Invertase/pectin methylesterase inhibitor family protein 33 180 - -
Phco8g02107 180 Pfam Plant invertase/pectin methylesterase inhibitor 36 175 IPR006501 GO:0004857
Phco8g02107 180 NCBIfam pectinesterase inhibitor domain 12 179 IPR006501 GO:0004857
Phco8g02107 180 CDD CIF_like 35 179 IPR034087 GO:0004857|GO:0043086
Phco8g02107 180 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 179 - -
Phco8g02107 180 SMART PMEI_2 33 175 IPR006501 GO:0004857
Phco8g02107 180 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 180 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02107 Phco-Chr8 22515871 22516413 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g02107 8 22515871 22516413 Phco8g02107 8 22515871 22516413 ECH